RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 SLC39A11Q8N1S5 342 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 CELF2-AS1Q8N7Q2 184 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 MCCC1Q96RQ3 725 aaPredicted RBP14.41□□□□□ -0.1
USP28-214ENST00000545540 CREBZFQ9NS37 354 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 DNAJC27Q9NZQ0 273 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 PSORS1C1Q9UIG5 152 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 OSGIN1Q9UJX0 560 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 B3GNT3Q9Y2A9 372 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 TRAV19A0A0A6YYK7 116 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 WASH3PC4AMC7 463 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 CNOT3O75175 753 aaKnown RBP14.41□□□□□ -0.1
USP28-214ENST00000545540 TIMP2P16035 220 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 SERPINB1P30740 379 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 HTRA3P83110 453 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 SELENBP1Q13228 472 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 PTGES3Q15185 160 aaKnown RBP14.41□□□□□ -0.1
USP28-214ENST00000545540 KCNJ8Q15842 424 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 TRIM60Q495X7 471 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 PAQR6Q6TCH4 344 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 LYSMD1Q96S90 227 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 CDADC1Q9BWV3 514 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 RSPO3Q9BXY4 272 aaPredicted RBP14.41□□□□□ -0.1
USP28-214ENST00000545540 ATP11BQ9Y2G3 1177 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 TMEM98Q9Y2Y6 226 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 PSMD11O00231 422 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 PPM1DO15297 605 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 KCNK2O95069 426 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 SERPIND1P05546 499 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 IL3P08700 152 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 DEPDC1Q5TB30 811 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 LIPJQ5W064 366 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 TCEAL8Q8IYN2 117 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 S100ZQ8WXG8 99 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 TMEM203Q969S6 136 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 GABARAPL1Q9H0R8 117 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 RETREG1Q9H6L5 497 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 HS3ST2Q9Y278 367 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 KCNE2Q9Y6J6 123 aa14.41□□□□□ -0.1
USP28-214ENST00000545540 CLCA1A8K7I4 914 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 GSTT2P0CG29 244 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 GSTT2BP0CG30 244 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 TIA1P31483 386 aaKnown RBP eCLIP14.4□□□□□ -0.1
USP28-214ENST00000545540 CNR2P34972 360 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 EIF2DP41214 584 aaKnown RBP14.4□□□□□ -0.1
USP28-214ENST00000545540 AP1S2P56377 157 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 PLEKHS1Q5SXH7 462 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 DESI1Q6ICB0 168 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 ADIPOR2Q86V24 386 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 TAGAPQ8N103 731 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 TCAIMQ8N3R3 496 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 PARP16Q8N5Y8 322 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 IQCF1Q8N6M8 205 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 ZSWIM3Q96MP5 696 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 HHIPQ96QV1 700 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 PRR14Q9BWN1 585 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 PLXND1Q9Y4D7 1925 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 FEZF1A0PJY2 475 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 ANKDD1BA6NHY2 528 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 AP3D1O14617 1153 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 CATP04040 527 aaKnown RBP14.4□□□□□ -0.1
USP28-214ENST00000545540 ELFN1P0C7U0 828 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 NPPBP16860 134 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 GGT2P36268 569 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 PIK3CBP42338 1070 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 CDK6Q00534 326 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 HSPB3Q12988 150 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 NFE2L1Q14494 772 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 ZNF284Q2VY69 593 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 ERICH5Q6P6B1 374 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 BRAT1Q6PJG6 821 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 PHF10Q8WUB8 498 aaKnown RBP14.4□□□□□ -0.1
USP28-214ENST00000545540 PPCDCQ96CD2 204 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 ZFYVE19Q96K21 471 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 VPS35Q96QK1 796 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 CNPPD1Q9BV87 410 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 CHST8Q9H2A9 424 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 TRBV4-1A0A0J9YWV2 114 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 TRBC2A0A5B9 178 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 NPC1O15118 1278 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 NTN1O95631 604 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 EFEMP2O95967 443 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 ZMAT1Q5H9K5 638 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 SLCO4C1Q6ZQN7 724 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 SPRED2Q7Z698 418 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 WDR36Q8NI36 951 aaKnown RBP14.4□□□□□ -0.1
USP28-214ENST00000545540 CHTF18Q8WVB6 975 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 YIPF4Q9BSR8 244 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 AP3M1Q9Y2T2 418 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 PCDHGA2Q9Y5H1 932 aa14.4□□□□□ -0.1
USP28-214ENST00000545540 GLOD5A6NK44 160 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 H3BN98 237 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 GRM6O15303 877 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 SLCO2B1O94956 709 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 OLFM2O95897 454 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 GSTM1P09488 218 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 PPP5CP53041 499 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 DAB2P98082 770 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 ELP6Q0PNE2 266 aa14.39□□□□□ -0.11
USP28-214ENST00000545540 SF3B4Q15427 424 aaKnown RBP eCLIP14.39□□□□□ -0.11
USP28-214ENST00000545540 IFI44LQ53G44 452 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms