RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PLK5Q496M5 336 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 RBM48Q5RL73 367 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TTC23Q5W5X9 447 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ZDHHC13Q8IUH4 622 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 SYTL1Q8IYJ3 562 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TESCQ96BS2 214 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 MAGEB10Q96LZ2 347 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 OR4K3Q96R72 315 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 FERD3LQ96RJ6 166 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 CPPED1Q9BRF8 314 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 THUMPD3Q9BV44 507 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 ACPTQ9BZG2 426 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 XKR8Q9H6D3 395 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 C11orf16Q9NQ32 467 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 DCAF13Q9NV06 445 aaKnown RBP12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 TMED5Q9Y3A6 229 aa12.4□□□□□ -0.42
CDK5RAP3-202ENST00000536708 PRAMEF4O60810 478 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PSMB5P28074 263 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 AFF3P51826 1226 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PHC1P78364 1004 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PPP2R2BQ00005 443 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF33BQ06732 778 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PMS2P3Q13401 168 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RAB39AQ14964 217 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 LPAL2Q16609 132 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NKG7Q16617 165 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 WDR45BQ5MNZ6 344 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OTUD3Q5T2D3 398 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PRAMEF9Q5VWM5 478 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF773Q6PK81 442 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 KRTCAP2Q8N6L1 136 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FBXO15Q8NCQ5 510 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OR9A1PQ8NGU1 263 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GPBAR1Q8TDU6 330 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FIG4Q92562 907 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TBC1D20Q96BZ9 403 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SLC47A1Q96FL8 570 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CMTM7Q96FZ5 175 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CCDC138Q96M89 665 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MUS81Q96NY9 551 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OR52E6Q96RD3 313 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TRIT1Q9H3H1 467 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SERHLQ9NQF3 203 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TAAR2Q9P1P5 351 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 IFT80Q9P2H3 777 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ZNF624Q9P2J8 865 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SNX6Q9UNH7 406 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 V9GYQ6 96 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 G3V2T6 193 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 BOLA2-SMG1P6H3BVE0 249 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CBFA2T3O75081 653 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PDYNP01213 254 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 F3P13726 295 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NME1P15531 152 aaKnown RBP12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 AVPR2P30518 371 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MAPK9P45984 424 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 BNC1Q01954 994 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ENPP6Q6UWR7 440 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 KCTD8Q6ZWB6 473 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 THAP5Q7Z6K1 395 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TAF8Q7Z7C8 310 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 STK32CQ86UX6 486 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 IQCHQ86VS3 1027 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FAM86B1Q8N7N1 296 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 LINC01555Q8NAE3 123 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 BORCS5Q969J3 196 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ITCHQ96J02 903 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 FCRL1Q96LA6 429 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SOX17Q9H6I2 414 aaPredicted RBP12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RMND5AQ9H871 391 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ACTR8Q9H981 624 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TBC1D23Q9NUY8 699 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 BLOC1S6Q9UL45 172 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PCDHB14Q9Y5E9 798 aa12.39□□□□□ -0.43
CDK5RAP3-202ENST00000536708 B4DGG1 531 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 E7EQ34 232 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CREG1O75629 220 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CST1P01037 141 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CSF2P04141 144 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CTSEP14091 401 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 MAPK1P28482 360 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PTPN6P29350 595 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SHMT2P34897 504 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 PNLIPRP1P54315 467 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RAB15P59190 212 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TAP2Q03519 686 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 TUBA3CQ13748 450 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 ANGPT1Q15389 498 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 THOC6Q86W42 341 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 LRRC56Q8IYG6 542 aaPredicted RBP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CLEC4FQ8N1N0 589 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 OR52E1Q8NGJ3 308 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 GIPC3Q8TF64 312 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SELENOMQ8WWX9 145 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 HDAC2Q92769 488 aaKnown RBP12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 NELL1Q92832 810 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 RAD51AP1Q96B01 352 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 SDCCAG3Q96C92 435 aa12.38□□□□□ -0.43
CDK5RAP3-202ENST00000536708 CAMK1GQ96NX5 476 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms