RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 CEACAM7Q14002 265 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 GRB14Q14449 540 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 SPHARQ15513 63 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 CEBPEQ15744 281 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 ACCSLQ4AC99 568 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 FGD3Q5JSP0 725 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 IRGCQ6NXR0 463 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 SPSB3Q6PJ21 355 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 TMEM207Q6UWW9 146 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 C9orf139Q6ZV77 190 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 FCRLAQ7L513 359 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 TRMT11Q7Z4G4 463 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 KLHDC9Q8NEP7 349 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 OR4C3Q8NH37 302 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 OR1L3Q8NH93 324 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 HPSE2Q8WWQ2 592 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 GLYATL1Q969I3 302 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 GPR137Q96N19 417 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 MEIS3Q99687 375 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 COQ7Q99807 217 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 PIGQQ9BRB3 760 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 CCM2Q9BSQ5 444 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 NUSAP1Q9BXS6 441 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 SIRPDQ9H106 197 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 DPH5Q9H2P9 285 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 RNF186Q9NXI6 227 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 PILRAQ9UKJ1 303 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 MRPS2Q9Y399 296 aaKnown RBP4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 GAPVD1Q14C86 1478 aa4.47□□□□□ -1.69
CTNNA1-233ENST00000522052 ATAD2BQ9ULI0 1458 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 A0A0U1RRA0 63 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 ATP6AP2A0A1C7CYW4 349 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 SERINC4A6NH21 518 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 KLF11O14901 512 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 OGTO15294 1046 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 NME2P1O60361 137 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 SAP30O75446 220 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 CPNE6O95741 557 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 CAVIN2O95810 425 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 NGFP01138 241 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 SERPINF2P08697 491 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 T-ENOLP0DO92 83 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 FCARP24071 287 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 ITGA3P26006 1051 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 THBS3P49746 956 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 PRKCEQ02156 737 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 SPP2Q13103 211 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 SGCGQ13326 291 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 TRADDQ15628 312 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 TEX35Q5T0J7 233 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 TCEAL6Q6IPX3 200 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 OLFM4Q6UX06 510 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 LEKR1Q6ZMV7 388 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 C17orf107Q6ZR85 190 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 ZNF575Q86XF7 245 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 CIARTQ8N365 385 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 OR56B1Q8NGI3 324 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 LMO3Q8TAP4 145 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 CD99L2Q8TCZ2 262 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 GANCQ8TET4 914 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 APOBEC4Q8WW27 367 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 BPIFA2Q96DR5 249 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 C16orf58Q96GQ5 468 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 C10orf90Q96M02 699 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 NEDD4LQ96PU5 975 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 TAAR6Q96RI8 345 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 SSX3Q99909 188 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 FTHL17Q9BXU8 183 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 PITPNM3Q9BZ71 974 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 GANQ9H2C0 597 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 MTIF3Q9H2K0 278 aaKnown RBP4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 VIPAS39Q9H9C1 493 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 SIX2Q9NPC8 291 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 HOMER3Q9NSC5 361 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 FAM212BQ9NTI7 297 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 ZFP57Q9NU63 452 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 HACD3Q9P035 362 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 NARFQ9UHQ1 456 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 PLA2G4CQ9UP65 541 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 KIF13AQ9H1H9 1805 aa4.46□□□□□ -1.7
CTNNA1-233ENST00000522052 A0A087WUV0 522 aaPredicted RBP4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 TRBV4-1A0A0J9YWV2 114 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 DENND3A2RUS2 1198 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 EEF2KO00418 725 aaKnown RBP4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 CHEK1O14757 476 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 CIDEAO60543 219 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 CYTIPO60759 359 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 LRP3O75074 770 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 DIRAS3O95661 229 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 CT45A8P0DMV1 189 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 CT45A9P0DMV2 189 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 AMD1P17707 334 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 HSPA1LP34931 641 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 TNFRSF4P43489 277 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 LBX1P52954 281 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 DCDC1P59894 354 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 HERV-K104P63124 156 aa4.45□□□□□ -1.7
CTNNA1-233ENST00000522052 SP3Q02447 781 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms