RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 NR0B1P51843 470 aaKnown RBP5.67□□□□□ -1.5
BRCA1-224ENST00000497488 HNRNPH2P55795 449 aaKnown RBP5.67□□□□□ -1.5
BRCA1-224ENST00000497488 CTSWP56202 376 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 HERV-K104P63124 156 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 RASGEF1BQ0VAM2 473 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 ST3GAL1Q11201 340 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 ZBTB17Q13105 803 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 SELPLGQ14242 412 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 KRT71Q3SY84 523 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 TIGD2Q4W5G0 525 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 MPPE1Q53F39 396 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 PPP6R3Q5H9R7 873 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-224ENST00000497488 TTC23Q5W5X9 447 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 NIPAL3Q6P499 406 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 Q6ZNX1 250 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 SHFQ7M4L6 423 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 ZNF367Q7RTV3 350 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 CDR2LQ86X02 465 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-224ENST00000497488 WDR49Q8IV35 697 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 UBE2J2Q8N2K1 259 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 SMYD1Q8NB12 490 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 C17orf47Q8NEP4 570 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 ENGASEQ8NFI3 743 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 OR2AK2Q8NG84 335 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 SLC2A14Q8TDB8 520 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 EDAQ92838 391 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 EMG1Q92979 244 aaKnown RBP5.67□□□□□ -1.5
BRCA1-224ENST00000497488 THOC1Q96FV9 657 aaKnown RBP5.67□□□□□ -1.5
BRCA1-224ENST00000497488 NPY6RQ99463 290 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 MTERF1Q99551 399 aaKnown RBP5.67□□□□□ -1.5
BRCA1-224ENST00000497488 SPRY4Q9C004 299 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 NACA2Q9H009 215 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 HAUS4Q9H6D7 363 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 RNF14Q9UBS8 474 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 TINAGQ9UJW2 476 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 TMED7Q9Y3B3 224 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 LOXL2Q9Y4K0 774 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 ATXN2Q99700 1313 aaKnown RBP5.67□□□□□ -1.5
BRCA1-224ENST00000497488 PCDH11YQ9BZA8 1340 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 PARD3Q8TEW0 1356 aa5.67□□□□□ -1.5
BRCA1-224ENST00000497488 PIK3C2GO75747 1445 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 KIAA1217Q5T5P2 1943 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 CENPVL1A0A0U1RR11 272 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 C2CD4BA6NLJ0 364 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 POC1B-GALNT4F8VUJ3 575 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 M0R296 226 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 EXTL3O43909 919 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 TOM1O60784 492 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 DNAJB6O75190 326 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 WBP4O75554 376 aaKnown RBP5.66□□□□□ -1.5
BRCA1-224ENST00000497488 CPNE6O95741 557 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 OTCP00480 354 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 ITGB3P05106 788 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 MED14OSP0DP75 135 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 SLC2A3P11169 496 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 HNF1AP20823 631 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 BMI1P35226 326 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 GRIA1P42261 906 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 MAGEA1P43355 309 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 PPT1P50897 306 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 NLRP11P59045 1033 aaKnown RBP5.66□□□□□ -1.5
BRCA1-224ENST00000497488 NUCB2P80303 420 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 TGM3Q08188 693 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 TRIP10Q15642 601 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 EFNB3Q15768 340 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 KCNA10Q16322 511 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 SSX2Q16385 188 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 EXOC3L2Q2M3D2 409 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 UGT3A2Q3SY77 523 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 ZC2HC1CQ53FD0 456 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-224ENST00000497488 ZNF385BQ569K4 471 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 NT5DC1Q5TFE4 455 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 ABHD17BQ5VST6 288 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 SLC39A4Q6P5W5 647 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 YRDCQ86U90 279 aaKnown RBP5.66□□□□□ -1.5
BRCA1-224ENST00000497488 ADGRG3Q86Y34 549 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 LRRC75A-AS1Q8N1F1 130 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 GPRC5AQ8NFJ5 357 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 OR14A16Q8NHC5 309 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 PNPT1Q8TCS8 783 aaKnown RBP5.66□□□□□ -1.5
BRCA1-224ENST00000497488 PHYHIPQ92561 330 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 MAP4K1Q92918 833 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 GLYATL1Q969I3 302 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 MARK4Q96L34 752 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 NUP58Q9BVL2 599 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 ACTL8Q9H568 366 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 AAMDCQ9H7C9 122 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 GKN1Q9NS71 199 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 C1RLQ9NZP8 487 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 SPATA7Q9P0W8 599 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 B9D1Q9UPM9 204 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 TSC22D4Q9Y3Q8 395 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 SLCO1B1Q9Y6L6 691 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 COMMD3-BMI1R4GMX3 469 aa5.66□□□□□ -1.5
BRCA1-224ENST00000497488 MYOM2P54296 1465 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 NRXN1Q9ULB1 1477 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 TRAV18A0A075B6X5 111 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 A0A1B0GTQ1 180 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 ARHGEF35A5YM69 484 aa5.65□□□□□ -1.5
BRCA1-224ENST00000497488 MEI4A8MW99 385 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms