RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 PDLIM3Q53GG5 364 aaPredicted RBP3.25□□□□□ -1.89
CLK1-214ENST00000496205 AGAP6Q5VW22 663 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 ZNF772Q68DY9 489 aaPredicted RBP3.25□□□□□ -1.89
CLK1-214ENST00000496205 NEK5Q6P3R8 708 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 DHRS11Q6UWP2 260 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 CCDC73Q6ZRK6 1079 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 RBM43Q6ZSC3 357 aaKnown RBP3.25□□□□□ -1.89
CLK1-214ENST00000496205 C1orf186Q6ZWK4 172 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 SLC24A5Q71RS6 500 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 G2E3Q7L622 706 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 COX8CQ7Z4L0 72 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 LACC1Q8IV20 430 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 GBP7Q8N8V2 638 aaPredicted RBP3.25□□□□□ -1.89
CLK1-214ENST00000496205 GMCL1P1Q8NEA9 526 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 OR4C15Q8NGM1 316 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 METTL21AQ8WXB1 218 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 DYRK2Q92630 601 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 AZIN2Q96A70 460 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 NXPE2Q96DL1 559 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 FBXO17Q96EF6 278 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 GIMAP5Q96F15 307 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 C5orf30Q96GV9 206 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 CDKN2AIPNLQ96HQ2 116 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 C2orf48Q96LS8 159 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 NECTIN4Q96NY8 510 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 CUEDC2Q9H467 287 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 C10orf88Q9H8K7 445 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 AKIRIN1Q9H9L7 192 aaPredicted RBP3.25□□□□□ -1.89
CLK1-214ENST00000496205 RNF186Q9NXI6 227 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 PSORS1C1Q9UIG5 152 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 FBXW2Q9UKT8 454 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 CCPG1Q9ULG6 757 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 GRID1Q9ULK0 1009 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 PYGO1Q9Y3Y4 419 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 ANGPTL3Q9Y5C1 460 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 SMCHD1A6NHR9 2005 aa3.25□□□□□ -1.89
CLK1-214ENST00000496205 NEDD4P46934 1319 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 IL16Q14005 1332 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 NPHP3Q7Z494 1330 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 A0A087X002 238 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 C13orf42A0A1B0GVH6 325 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 CLRN2A0PK11 232 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 ANGPT2O15123 496 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 ECE2O60344 883 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 SMPD2O60906 423 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 KHDRBS3O75525 346 aaKnown RBP3.24□□□□□ -1.89
CLK1-214ENST00000496205 APBB3O95704 486 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 EDN1P05305 212 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 NUDT17P0C025 328 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 CEACAM1P13688 526 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 AZU1P20160 251 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 CCND2P30279 289 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 NOVP48745 357 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 PHEXP78562 749 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 ABRQ12979 859 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 TMEM132DQ14C87 1099 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 PDK1Q15118 436 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 IFI44LQ53G44 452 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 LCN1P1Q5VSP4 162 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 ZNF790Q6PG37 636 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 PSRC1Q6PGN9 363 aaPredicted RBP3.24□□□□□ -1.89
CLK1-214ENST00000496205 NOTCH2NLQ7Z3S9 236 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 LAX1Q8IWV1 398 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 TMEM178AQ8NBL3 297 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 IPMKQ8NFU5 416 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 SLC26A7Q8TE54 656 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 UBLCP1Q8WVY7 318 aaPredicted RBP3.24□□□□□ -1.89
CLK1-214ENST00000496205 LGALS12Q96DT0 336 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 DUX3Q96PT4 197 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 NAP1L3Q99457 506 aaPredicted RBP3.24□□□□□ -1.89
CLK1-214ENST00000496205 TXN2Q99757 166 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 RNF121Q9H920 327 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 TBC1D13Q9NVG8 400 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.24□□□□□ -1.89
CLK1-214ENST00000496205 TDRKHQ9Y2W6 561 aaKnown RBP3.24□□□□□ -1.89
CLK1-214ENST00000496205 DISP3Q9P2K9 1392 aa3.24□□□□□ -1.89
CLK1-214ENST00000496205 ZNF732B4DXR9 585 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 BLOC1S5-TXNDC5H3BN57 136 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 TEX28O15482 410 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 EXTL3O43909 919 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 SSX5O60225 188 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 LRCH4O75427 683 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 SAP30O75446 220 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 PRDM1O75626 825 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 AP2A2O94973 939 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 REC8O95072 547 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 STBD1O95210 358 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 CXCL14O95715 111 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 MT-ND2P03891 347 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 PRSS1P07477 247 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 YES1P07947 543 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 GNB3P16520 340 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 OR1D2P34982 312 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 SOX3P41225 446 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 HERV-K104P61576 105 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 GNB1P62873 340 aa3.23□□□□□ -1.89
CLK1-214ENST00000496205 RPP38P78345 283 aaKnown RBP3.23□□□□□ -1.89
CLK1-214ENST00000496205 SRSF9Q13242 221 aaKnown RBP eCLIP3.23□□□□□ -1.89
CLK1-214ENST00000496205 MSLNQ13421 630 aaPredicted RBP3.23□□□□□ -1.89
CLK1-214ENST00000496205 DPYSQ14117 519 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms