RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 FZD3Q9NPG1 666 aa4.83□□□□□ -1.64
SND1-216ENST00000492840 ATAD3AQ9NVI7 634 aa4.83□□□□□ -1.64
SND1-216ENST00000492840 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.83□□□□□ -1.644e-6■□□□□ 8.6
SND1-216ENST00000492840 PKD2L2Q9NZM6 624 aa4.83□□□□□ -1.64
SND1-216ENST00000492840 RABL2AQ9UBK7 228 aaPredicted RBP4.83□□□□□ -1.64
SND1-216ENST00000492840 CLIP2Q9UDT6 1046 aa4.83□□□□□ -1.64
SND1-216ENST00000492840 CTNNA3Q9UI47 895 aa4.83□□□□□ -1.64
SND1-216ENST00000492840 PACSIN3Q9UKS6 424 aa4.83□□□□□ -1.64
SND1-216ENST00000492840 RIF1Q5UIP0 2472 aaKnown RBP4.83□□□□□ -1.64
SND1-216ENST00000492840 BRWD1Q9NSI6 2320 aa4.83□□□□□ -1.64
SND1-216ENST00000492840 MYH3P11055 1940 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 FAM208BQ5VWN6 2430 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 TEX13DA0A0J9YY54 714 aaPredicted RBP4.82□□□□□ -1.64
SND1-216ENST00000492840 A0A0U1RRA0 63 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 SMIM35A0A1B0GVV1 85 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 ZSCAN5CA6NGD5 496 aaPredicted RBP4.82□□□□□ -1.64
SND1-216ENST00000492840 C15orf62A8K5M9 175 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 PRR32B1ATL7 298 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 AP3B1O00203 1094 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 E2F3O00716 465 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 GAPDHSO14556 408 aaPredicted RBP4.82□□□□□ -1.64
SND1-216ENST00000492840 PSMD3O43242 534 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 RFPL2O75678 378 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 NDUFB8O95169 186 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 H1F0P07305 194 aaKnown RBP4.82□□□□□ -1.64
SND1-216ENST00000492840 NUDT17P0C025 328 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 PRDX6P30041 224 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 SSTR1P30872 391 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 MNDAP41218 407 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 MMP13P45452 471 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 ENTPD1P49961 510 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 MTTPP55157 894 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 CX3CL1P78423 397 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 GPM6BQ13491 265 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 ZKSCAN8Q15776 578 aaPredicted RBP4.82□□□□□ -1.64
SND1-216ENST00000492840 CCDC142Q17RM4 750 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 KIF19Q2TAC6 998 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 ODF3L2Q3SX64 289 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 BOLA3Q53S33 107 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 SPDYCQ5MJ68 293 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 CCDC183Q5T5S1 534 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 RAD9BQ6WBX8 426 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 Q6ZTK2 550 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 GLCCI1Q86VQ1 547 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.82□□□□□ -1.64
SND1-216ENST00000492840 FAM133AQ8N9E0 248 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 LEMD2Q8NC56 503 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 LPAR1Q92633 364 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 PGM2Q96G03 612 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 URB1-AS1Q96HZ7 61 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 TAAR6Q96RI8 345 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 CSF3RQ99062 836 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 TCHPQ9BT92 498 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 RAB33BQ9H082 229 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 ZDHHC6Q9H6R6 413 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 CD209Q9NNX6 404 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 PALMDQ9NP74 551 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 MIS18AQ9NYP9 233 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 CNOT2Q9NZN8 540 aaKnown RBP4.82□□□□□ -1.64
SND1-216ENST00000492840 COX16Q9P0S2 106 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 PTGFRNQ9P2B2 879 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 FAM153AQ9UHL3 310 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 AMDHD2Q9Y303 409 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 LOC285556D6RIA3 1793 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 GVINP1Q7Z2Y8 2422 aa4.82□□□□□ -1.64
SND1-216ENST00000492840 PLXNA3P51805 1871 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 DOCK1Q14185 1865 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 A0A1B0GUL6 1792 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 TMEM191CA6NGB0 347 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 BECN2A8MW95 431 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 C17orf105B2RV13 164 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 CHADO15335 359 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 SCO2O43819 266 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 ACSL4O60488 711 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 RNASEH1O60930 286 aaKnown RBP4.81□□□□□ -1.64
SND1-216ENST00000492840 PROP1O75360 226 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 STBD1O95210 358 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 OR6A2O95222 327 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 GAS8O95995 478 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 CYP1A2P05177 515 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 THRBP10828 461 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 CSF2RAP15509 400 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 POLR2CP19387 275 aaPredicted RBP4.81□□□□□ -1.64
SND1-216ENST00000492840 HNRNPA2B1P22626 353 aaKnown RBP4.81□□□□□ -1.64
SND1-216ENST00000492840 CYP2F1P24903 491 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 PSMA5P28066 241 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 SSTR2P30874 369 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 NSFP46459 744 aaKnown RBP4.81□□□□□ -1.64
SND1-216ENST00000492840 KCNJ4P48050 445 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 DMPKQ09013 629 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 CETN1Q12798 172 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 SLC10A2Q12908 348 aaPredicted RBP4.81□□□□□ -1.64
SND1-216ENST00000492840 RIPK1Q13546 671 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 DAZAP2Q15038 168 aaPredicted RBP4.81□□□□□ -1.64
SND1-216ENST00000492840 RABL6Q3YEC7 729 aaPredicted RBP4.81□□□□□ -1.64
SND1-216ENST00000492840 PHLDA2Q53GA4 152 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 WBP2NLQ6ICG8 309 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 SULT1C3Q6IMI6 304 aa4.81□□□□□ -1.64
SND1-216ENST00000492840 CCNI2Q6ZMN8 369 aaPredicted RBP4.81□□□□□ -1.64
SND1-216ENST00000492840 ZNF704Q6ZNC4 412 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms