RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 OR4C3Q8NH37 302 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 SPATA18Q8TC71 538 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 UBTD2Q8WUN7 234 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 C16orf58Q96GQ5 468 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 SENP5Q96HI0 755 aaPredicted RBP3.82□□□□□ -1.8
XRN1-213ENST00000489241 NEDD4LQ96PU5 975 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 ASCL2Q99929 193 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 LRRC2Q9BYS8 371 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 DPEP2Q9H4A9 486 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 NGBQ9NPG2 151 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 EXOC1Q9NV70 894 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 PANK4Q9NVE7 773 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.82□□□□□ -1.8
XRN1-213ENST00000489241 PRDM4Q9UKN5 801 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 GRID1Q9ULK0 1009 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 AURKCQ9UQB9 309 aa3.82□□□□□ -1.8
XRN1-213ENST00000489241 UBE4BO95155 1302 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 A0A087WYN8 130 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 SERINC4A6NH21 518 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 ERVV-2B6SEH9 535 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 FAM72CH0Y354 149 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 EPHB6O15197 1021 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 SYT7O43581 403 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 CLN5O75503 358 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 KRT33AO76009 404 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 EPOP01588 193 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 HEXBP07686 556 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 KRT5P13647 590 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 AKT2P31751 481 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 NSFP46459 744 aaKnown RBP3.81□□□□□ -1.8
XRN1-213ENST00000489241 KLHL30Q0D2K2 578 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 KRT31Q15323 416 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 PTPN14Q15678 1187 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 CEBPEQ15744 281 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 HERC4Q5GLZ8 1057 aaPredicted RBP3.81□□□□□ -1.8
XRN1-213ENST00000489241 FAM72AQ5TYM5 149 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 ZNF776Q68DI1 518 aaPredicted RBP3.81□□□□□ -1.8
XRN1-213ENST00000489241 FAM72DQ6L9T8 149 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 SLC27A4Q6P1M0 643 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 TMEM207Q6UWW9 146 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 UNC5DQ6UXZ4 953 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 C17orf107Q6ZR85 190 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 SLC16A9Q7RTY1 509 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 ZNF329Q86UD4 541 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 FAM72BQ86X60 149 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 LMNTD2Q8IXW0 634 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 GPC2Q8N158 579 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 FAM89BQ8N5H3 189 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 TRPV3Q8NET8 790 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 OR1L3Q8NH93 324 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 CD99L2Q8TCZ2 262 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 HPSE2Q8WWQ2 592 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 LPAR4Q99677 370 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 SPAG8Q99932 426 aaPredicted RBP3.81□□□□□ -1.8
XRN1-213ENST00000489241 FAM49AQ9H0Q0 323 aaPredicted RBP3.81□□□□□ -1.8
XRN1-213ENST00000489241 DCLRE1BQ9H816 532 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 SIX2Q9NPC8 291 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 FAM153AQ9UHL3 310 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 PILRAQ9UKJ1 303 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 EXOC7Q9UPT5 735 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 PPP2R2CQ9Y2T4 447 aa3.81□□□□□ -1.8
XRN1-213ENST00000489241 TCF20Q9UGU0 1960 aaKnown RBP3.81□□□□□ -1.8
XRN1-213ENST00000489241 TRBV4-1A0A0J9YWV2 114 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 ATP6AP2A0A1C7CYW4 349 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 SRRM4A7MD48 611 aaKnown RBP3.8□□□□□ -1.8
XRN1-213ENST00000489241 A8MVM7 634 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 NDC80O14777 642 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 CPLX1O14810 134 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 TEX28O15482 410 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 LINC01565O15544 149 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 EXTL3O43909 919 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 CIDEAO60543 219 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 LRP3O75074 770 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 SAP30O75446 220 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 CPNE6O95741 557 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 IFNB1P01574 187 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 FUT1P19526 365 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 DNAJB1P25685 340 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 MAGEA11P43364 429 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 TKTL1P51854 596 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 ZNF131P52739 623 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 LBX1P52954 281 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 IRX4P78413 519 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 CDR2Q01850 454 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 GPR50Q13585 617 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 ITGA9Q13797 1035 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 CEACAM7Q14002 265 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 SPHARQ15513 63 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 SLC35E4Q6ICL7 350 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 RBMS3Q6XE24 437 aaKnown RBP3.8□□□□□ -1.8
XRN1-213ENST00000489241 C15orf52Q6ZUT6 534 aaKnown RBP3.8□□□□□ -1.8
XRN1-213ENST00000489241 CYP4V2Q6ZWL3 525 aaPredicted RBP3.8□□□□□ -1.8
XRN1-213ENST00000489241 TRMT11Q7Z4G4 463 aaKnown RBP3.8□□□□□ -1.8
XRN1-213ENST00000489241 ZNF444Q8N0Y2 327 aaPredicted RBP3.8□□□□□ -1.8
XRN1-213ENST00000489241 APOBEC4Q8WW27 367 aaKnown RBP3.8□□□□□ -1.8
XRN1-213ENST00000489241 TM9SF4Q92544 642 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 SLC35C1Q96A29 364 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 BPIFA2Q96DR5 249 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 C14orf79Q96F83 325 aa3.8□□□□□ -1.8
XRN1-213ENST00000489241 C10orf90Q96M02 699 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms