RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 OPN1SWP03999 348 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 IL3P08700 152 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 CTF1Q16619 201 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 PRSS53Q2L4Q9 553 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 PROX2Q3B8N5 592 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 FAM129CQ86XR2 697 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 MMAAQ8IVH4 418 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 DCUN1D3Q8IWE4 304 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 SFTPA1Q8IWL2 248 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 KRT78Q8N1N4 520 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 DRAXINQ8NBI3 349 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 PLA2G15Q8NCC3 412 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 ZNF540Q8NDQ6 660 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 OR5AR1Q8NGP9 310 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 NFKBIDQ8NI38 313 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 GIPC3Q8TF64 312 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 ACSL6Q9UKU0 697 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 PLAGL1Q9UM63 463 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 TMEM98Q9Y2Y6 226 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 PRKAB1Q9Y478 270 aa17.21■□□□□ 0.35
PDLIM7-207ENST00000486828 A0A1W2PRB8 838 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 FAM20BO75063 409 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 GABARAPO95166 117 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 MYOGP15173 224 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 FSHRP23945 695 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 CHI3L1P36222 383 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 MAP2K4P45985 399 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 PRIM2P49643 509 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 BMXP51813 675 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 EEF1A2Q05639 463 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 TMED1Q13445 227 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 CYP2A13Q16696 494 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 ADAMTSL4Q6UY14 1074 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 SVOPQ8N4V2 548 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 C12orf76Q8N812 135 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 MIPOL1Q8TD10 442 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 TAMM41Q96BW9 452 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 HRASLS5Q96KN8 279 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 ASB16Q96NS5 453 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 TESMINQ9Y4I5 508 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 DENND4AQ7Z401 1863 aa17.2■□□□□ 0.34
PDLIM7-207ENST00000486828 C1QTNF3-AMACRE9PGA6 284 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 RGS10O43665 173 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 MT-ND2P03891 347 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 BMP8BP34820 402 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 KRT20P35900 424 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 P2RY2P41231 377 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 MASP1P48740 699 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 C21orf59P57076 290 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 CDK6Q00534 326 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 MVKQ03426 396 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 SMN1Q16637 294 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 SLC5A12Q1EHB4 618 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 ZNF630Q2M218 657 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 ANKDD1AQ495B1 522 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 DSG4Q86SJ6 1040 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 SLC9B2Q86UD5 537 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 AMZ2Q86W34 360 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 RNF130Q86XS8 419 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 IPCEF1Q8WWN9 437 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 TFGQ92734 400 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 HDAC8Q9BY41 377 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 PRO3102Q9H379 93 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 RASSF1Q9NS23 344 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 THSD1Q9NS62 852 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 MYO7AQ13402 2215 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 PCDHGA12O60330 932 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 PFDN1O60925 122 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 WBP4O75554 376 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 KRT75O95678 551 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 ERGP11308 486 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 TNFRSF1BP20333 461 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 NR4A1P22736 598 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 TPP2P29144 1249 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 CRB2Q5IJ48 1285 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 SYT6Q5T7P8 510 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 ENTHD1Q8IYW4 607 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 C2orf73Q8N5S3 287 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 OR4C15Q8NGM1 316 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 OR5AK3PQ8NH89 298 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 APH1BQ8WW43 257 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 SUSD6Q92537 303 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 RAB7BQ96AH8 199 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 YIPF6Q96EC8 236 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 ZNF300Q96RE9 604 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 RHNO1Q9BSD3 238 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 TMEM184CQ9NVA4 438 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 ICKQ9UPZ9 632 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 TDRKHQ9Y2W6 561 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 MAP4K5Q9Y4K4 846 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 PCDHGA6Q9Y5G7 932 aa17.19■□□□□ 0.34
PDLIM7-207ENST00000486828 AXIN1O15169 862 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 MAN1A2O60476 641 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 IFNA14P01570 189 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 ARAFP10398 606 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 ITGA2P17301 1181 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 SOAT1P35610 550 aa17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 PXNP49023 591 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-207ENST00000486828 MLLT10P55197 1068 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms