RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 MGAT4AQ9UM21 535 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 OARD1Q9Y530 152 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 PRAMEF25A6NGN4 478 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 IGHA2P01877 340 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 RAF1P04049 648 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 HOXD4P09016 255 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-208ENST00000486641 PIPP12273 146 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-208ENST00000486641 EPB42P16452 691 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 LPOP22079 712 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-208ENST00000486641 PCSK1P29120 753 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 SDC2P34741 201 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 ADCYAP1R1P41586 468 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 CAV3P56539 151 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 IKZF1Q13422 519 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 CYP27C1Q4G0S4 372 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 DGKKQ5KSL6 1271 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 FBXL22Q6P050 247 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 C16orf62Q7Z3J2 963 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 PDZD3Q86UT5 571 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 NANOGP1Q8N7R0 232 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 OR9Q1Q8NGQ5 310 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 SELENOMQ8WWX9 145 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 EXOC2Q96KP1 924 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 PAAF1Q9BRP4 392 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 ARHGAP39Q9C0H5 1083 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 P2RY12Q9H244 342 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 TPT1P8Q9HAU6 139 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 COMMD3Q9UBI1 195 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 SCML1Q9UN30 329 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 RAI2Q9Y5P3 530 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 SNX11Q9Y5W9 270 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-208ENST00000486641 ZAR1LA6NP61 321 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 INMT-MINDY4F8WBC2 141 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 PRAMEF11O60813 436 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 CLDN9O95484 217 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 SLC25A27O95847 323 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 PRLP01236 227 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 ACPPP15309 386 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 POU1F1P28069 291 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 PTGER3P43115 390 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 RGRP47804 291 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 AGFG1P52594 562 aaKnown RBP10.22□□□□□ -0.77
CCDC171-208ENST00000486641 DBPQ10586 325 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-208ENST00000486641 ABRQ12979 859 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 MTAPQ13126 283 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 UGT8Q16880 541 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 TIGD5Q53EQ6 642 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 TYW3Q6IPR3 259 aaKnown RBP10.22□□□□□ -0.77
CCDC171-208ENST00000486641 TMIGD1Q6UXZ0 262 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 MBOAT1Q6ZNC8 495 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 GHDCQ8N2G8 530 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 APOLD1Q96LR9 279 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 SERPINB11Q96P15 392 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 FAM129BQ96TA1 746 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 COPS8Q99627 209 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 SOSTQ9BQB4 213 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 EBPLQ9BY08 206 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 FAM126AQ9BYI3 521 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-208ENST00000486641 ANKRA2Q9H9E1 313 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 FTSJ1Q9UET6 329 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 PCDHGB7Q9Y5F8 929 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 CDH10Q9Y6N8 788 aa10.22□□□□□ -0.77
CCDC171-208ENST00000486641 GTPBP1O00178 669 aaKnown RBP10.21□□□□□ -0.77
CCDC171-208ENST00000486641 MPZL2O60487 215 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 ALDH1A1P00352 501 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 GASTP01350 101 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 TPOP07202 933 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 CTPS1P17812 591 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 PSMA3P25788 255 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 CRISP1P54107 249 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 RIN1Q13671 783 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 FCN2Q15485 313 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 GARNL3Q5VVW2 1013 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 FRMPD2BQ6IN97 320 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 CNIH2Q6PI25 160 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 MSANTD1Q6ZTZ1 278 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 GPALPP1Q8IXQ4 340 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 LAS2Q8IYD9 372 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 GPR65Q8IYL9 337 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 OR11H4Q8NGC9 324 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 HASPINQ8TF76 798 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 DNAJB3Q8WWF6 145 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 KLHL6Q8WZ60 621 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 PHF21AQ96BD5 680 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 SAMD11Q96NU1 681 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 NELL2Q99435 816 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 KATNB1Q9BVA0 655 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 MND1Q9BWT6 205 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 CIPCQ9C0C6 399 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 CHST8Q9H2A9 424 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 ERVMER34-1Q9H9K5 563 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 ZFP64Q9NPA5 681 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 FZD3Q9NPG1 666 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 RBPJLQ9UBG7 517 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 ING4Q9UNL4 249 aa10.21□□□□□ -0.77
CCDC171-208ENST00000486641 IGLV3-10A0A075B6K4 115 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 A0A0A6YYJ9 748 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 RPS10-NUDT3A0A1W2PQS6 291 aa10.21□□□□□ -0.78
CCDC171-208ENST00000486641 MOXD2PA6NHM9 499 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms