RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 NOL6Q9H6R4 1146 aaKnown RBP13.26□□□□□ -0.29
BRAT1-203ENST00000467558 PALMDQ9NP74 551 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 FZD3Q9NPG1 666 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 KNL1Q8NG31 2342 aa13.26□□□□□ -0.29
BRAT1-203ENST00000467558 C1orf226A1L170 272 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 BTN3A3O00478 584 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 C7P10643 843 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 MYBPC1Q00872 1141 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 SLAMF1Q13291 335 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 TBL1XR1Q9BZK7 514 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 OR51V1Q9H2C8 321 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 TOR3AQ9H497 397 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 ADAMTS6Q9UKP5 1117 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 GPR34Q9UPC5 381 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 TSC22D4Q9Y3Q8 395 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 OR6C74A6NCV1 312 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 KRT33AO76009 404 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 ACADLP28330 430 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 PRDX3P30048 256 aaKnown RBP13.25□□□□□ -0.29
BRAT1-203ENST00000467558 RCVRNP35243 200 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 STAT5AP42229 794 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 SGSHP51688 502 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 NRG3P56975 720 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 ZBED5Q49AG3 693 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 NADK2Q4G0N4 442 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 PYDC2Q56P42 97 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 LINC01599Q8WXQ3 324 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 IL4I1Q96RQ9 567 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 EXO5Q9H790 373 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 FARSBQ9NSD9 589 aaKnown RBP13.25□□□□□ -0.29
BRAT1-203ENST00000467558 SERTAD3Q9UJW9 196 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 ANKRD12Q6UB98 2062 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 SEMA4FO95754 770 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 AOAHP28039 575 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 HOXA9P31269 272 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 RPS15AP62244 130 aaKnown RBP13.25□□□□□ -0.29
BRAT1-203ENST00000467558 TUBA4AP68366 448 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 KIAA1614Q5VZ46 1190 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 ZNF852Q6ZMS4 543 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 COMMD6Q7Z4G1 85 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 AQP11Q8NBQ7 271 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 UBASH3BQ8TF42 649 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 MZB1Q8WU39 189 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 DOHHQ9BU89 302 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 ACTL8Q9H568 366 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 MARK1Q9P0L2 795 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 TBX21Q9UL17 535 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 DNMT3AQ9Y6K1 912 aaPredicted RBP13.25□□□□□ -0.29
BRAT1-203ENST00000467558 ARHGEF33A8MVX0 844 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 LOC110117498-PIK3R3F6TDL0 507 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 TLR4O00206 839 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 NME4O00746 187 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 KIAA0355O15063 1070 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 SCAMP2O15127 329 aaKnown RBP13.25□□□□□ -0.29
BRAT1-203ENST00000467558 CXCL10P02778 98 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 HNRNPA2B1P22626 353 aaKnown RBP13.25□□□□□ -0.29
BRAT1-203ENST00000467558 SMSP52788 366 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 CDH15P55291 814 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 BNC1Q01954 994 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 ENPP2Q13822 863 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 DEFB134Q4QY38 66 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 APIPQ96GX9 242 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 POLR2J2Q9GZM3 115 aaKnown RBP13.25□□□□□ -0.29
BRAT1-203ENST00000467558 SMURF2Q9HAU4 748 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 TMEM184CQ9NVA4 438 aa13.25□□□□□ -0.29
BRAT1-203ENST00000467558 GRXCR2A6NFK2 248 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 ELOA3DA6NLF2 546 aaPredicted RBP13.24□□□□□ -0.29
BRAT1-203ENST00000467558 H7C0S8 307 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 RTCAO00442 366 aaKnown RBP13.24□□□□□ -0.29
BRAT1-203ENST00000467558 GMFGO60234 142 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 ZDHHC11BP0C7U3 371 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 CCKBRP32239 447 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 C1orf61Q13536 156 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 ELOA3BQ3SY89 546 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 CTSL3PQ5NE16 218 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 CATSPEREQ5SY80 951 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 DEFB119Q8N690 84 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 ELOA3Q8NG57 546 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 FBXO27Q8NI29 283 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 CDADC1Q9BWV3 514 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 BRF2Q9HAW0 419 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 CMTM6Q9NX76 183 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
BRAT1-203ENST00000467558 LIPT1Q9Y234 373 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 CCL26Q9Y258 94 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 PRSS21Q9Y6M0 314 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 GPR89AB7ZAQ6 455 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 PPP6CO00743 305 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 AXIN1O15169 862 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 RPLP0P05388 317 aaKnown RBP13.24□□□□□ -0.29
BRAT1-203ENST00000467558 GPR89BP0CG08 455 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 JUNDP17535 347 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 CTSCP53634 463 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 FAM78AQ5JUQ0 283 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 C11orf88Q6PI97 169 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 ASB11Q8WXH4 323 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 RIT1Q92963 219 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 ARMC5Q96C12 935 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 PCDHGA7Q9Y5G6 932 aa13.24□□□□□ -0.29
BRAT1-203ENST00000467558 ANKRD31Q8N7Z5 1873 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms