RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 TIA1P31483 386 aaKnown RBP eCLIP8.4□□□□□ -1.06
UBA3-208ENST00000465627 HNRNPH1P31943 449 aaKnown RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 CPA2P48052 419 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 GABRA4P48169 554 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 ARRB1P49407 418 aaPredicted RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 ARFIP1P53367 373 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 SNRPNP63162 240 aaKnown RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 PHC1P78364 1004 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 SQSTM1Q13501 440 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 DDX39BQ13838 428 aaKnown RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 CYLC2Q14093 348 aaPredicted RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 PTGR1Q14914 329 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 PLCL1Q15111 1095 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 HIST2H2ACQ16777 129 aaPredicted RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 IMPG1Q17R60 797 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 SPIN4Q56A73 249 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 COQ5Q5HYK3 327 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 KHDRBS2Q5VWX1 349 aaKnown RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 HIST2H2AA3Q6FI13 130 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 FIGLAQ6QHK4 219 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 HACD2Q6Y1H2 254 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 COMMD6Q7Z4G1 85 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 RABEPKQ7Z6M1 372 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 LIX1Q8N485 282 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 C1orf52Q8N6N3 182 aaKnown RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 TTLQ8NG68 377 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 OR4C6Q8NH72 309 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 WDR48Q8TAF3 677 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 BAHD1Q8TBE0 780 aaPredicted RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 TESCQ96BS2 214 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 SMIM10Q96HG1 83 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 EGLN2Q96KS0 407 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 APOLD1Q96LR9 279 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 BTBD10Q9BSF8 475 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 CADM1Q9BY67 442 aaKnown RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 CCDC167Q9P0B6 97 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 BAIAP2L1Q9UHR4 511 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 SLC6A14Q9UN76 642 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 EIF3LQ9Y262 564 aaKnown RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 RUVBL1Q9Y265 456 aaKnown RBP8.4□□□□□ -1.06
UBA3-208ENST00000465627 PCDHGA5Q9Y5G8 931 aa8.4□□□□□ -1.06
UBA3-208ENST00000465627 IGHV1OR21-1A0A087WYE8 117 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 A0A1W2PP18 115 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 ANKDD1BA6NHY2 528 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 B2RBV5 119 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 C9JVG2 144 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 GSC2O15499 205 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 HCRTR1O43613 425 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 OR1F1O43749 312 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 SH3BP5O60239 455 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 PCDHGA12O60330 932 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 PRMT3O60678 531 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 PRAMEF10O60809 474 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 SCN2BO60939 215 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 EEDO75530 441 aaKnown RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 SCELO95171 688 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 C9P02748 559 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 PVRP15151 417 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 PNLIPP16233 465 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 LORP23490 312 aaPredicted RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 TPP2P29144 1249 aaPredicted RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 GPR3P46089 330 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 STX1BP61266 288 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 RPS15AP62244 130 aaKnown RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 KCNJ2P63252 427 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 SIM1P81133 766 aaPredicted RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 PDE7AQ13946 482 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 RBBP5Q15291 538 aaKnown RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 REP15Q6BDI9 236 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 ZCCHC8Q6NZY4 707 aaKnown RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 PGM2L1Q6PCE3 622 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 CAMKMTQ7Z624 323 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 OOSP2Q86WS3 158 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 GATAD2AQ86YP4 633 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 KIF2BQ8N4N8 673 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 DPP10Q8N608 796 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 KRTCAP2Q8N6L1 136 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 OR10G6Q8NH81 332 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 NT5CQ8TCD5 201 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 KLHL29Q96CT2 875 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 RCN3Q96D15 328 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 MS4A6EQ96DS6 147 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 SPDL1Q96EA4 605 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 ZNF285Q96NJ3 590 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 FCRL4Q96PJ5 515 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 TRAPPC9Q96Q05 1148 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 F2RL3Q96RI0 385 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 GPATCH1Q9BRR8 931 aaKnown RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 SLC25A23Q9BV35 468 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 SEMA6CQ9H3T2 930 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 DDX31Q9H8H2 851 aaKnown RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 FAM60AQ9NP50 221 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 MCM8Q9UJA3 840 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 ERVK-11Q9UQG0 969 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 GOLGA4Q13439 2230 aaKnown RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 NAV3Q8IVL0 2385 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 MN1Q10571 1320 aaPredicted RBP8.39□□□□□ -1.07
UBA3-208ENST00000465627 RP1P56715 2156 aa8.39□□□□□ -1.07
UBA3-208ENST00000465627 A0A088AWK7 358 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms