RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 QRFPRQ96P65 431 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 KCNC2Q96PR1 638 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 SERPINI1Q99574 410 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 CENPKQ9BS16 269 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 TBCDQ9BTW9 1192 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 YIPF2Q9BWQ6 316 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 GPR87Q9BY21 358 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 CNTNAP3Q9BZ76 1288 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 FAM117AQ9C073 453 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 C20orf27Q9GZN8 174 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 SLC26A1Q9H2B4 701 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF395Q9H8N7 513 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 COPS7BQ9H9Q2 264 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 BRF2Q9HAW0 419 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 MED4Q9NPJ6 270 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 PRDM7Q9NQW5 492 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 HCN3Q9P1Z3 774 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 TRPC4Q9UBN4 977 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 CTSFQ9UBX1 484 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 IL17BQ9UHF5 180 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 GPN3Q9UHW5 284 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 KCND3Q9UK17 655 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 FARSAQ9Y285 508 aaKnown RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 SSUH2Q9Y2M2 353 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 FIS1Q9Y3D6 152 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 MAP4K5Q9Y4K4 846 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 PCDHGA6Q9Y5G7 932 aa11.17□□□□□ -0.62
CPNE1-221ENST00000462352 ANKRD11Q6UB99 2663 aaPredicted RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 TPRP12270 2363 aaKnown RBP11.17□□□□□ -0.62
CPNE1-221ENST00000462352 IGLV3-12A0A075B6K2 115 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 A0A087WV48 116 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 A0A088AWK7 358 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 SERTM1A2A2V5 107 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 TMEM233B4DJY2 109 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 PLPP1O14494 284 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 DNAJB6O75190 326 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 SEMA3DO95025 777 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 HSD3B1P14060 373 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF10P21506 573 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 HSD3B2P26439 372 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 CERS1P27544 350 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 PTPN4P29074 926 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 RAP1GDS1P52306 607 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ARFIP1P53367 373 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 FOXL2P58012 376 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 RPS18P62269 152 aaKnown RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 OLR1P78380 273 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 TLE3Q04726 772 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 CSTF3Q12996 717 aaKnown RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 NKG7Q16617 165 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 AP5B1Q2VPB7 878 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ATG16L1Q676U5 607 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 OR4C11Q6IEV9 310 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 SCIMPQ6UWF3 145 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF793Q6ZN11 406 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 TRIM42Q8IWZ5 723 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 CLYBLQ8N0X4 340 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 GBP7Q8N8V2 638 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 RAB3IL1Q8TBN0 382 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 STT3BQ8TCJ2 826 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 AGR3Q8TD06 166 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 CCNL2Q96S94 520 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 SERINC2Q96SA4 455 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 SORT1Q99523 831 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 EFHD1Q9BUP0 239 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 SORBS1Q9BX66 1292 aaKnown RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 MRPL1Q9BYD6 325 aaKnown RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ACPTQ9BZG2 426 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ROGDIQ9GZN7 287 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 MANSC1Q9H8J5 431 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 WDR54Q9H977 334 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 CLK4Q9HAZ1 481 aaKnown RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 MKKSQ9NPJ1 570 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 INTS9Q9NV88 658 aaKnown RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ZNF282Q9UDV7 671 aaPredicted RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ZDHHC2Q9UIJ5 367 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 ZMIZ1Q9ULJ6 1067 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 SLC12A4Q9UP95 1085 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 TRAF6Q9Y4K3 522 aa11.16□□□□□ -0.62
CPNE1-221ENST00000462352 MRPS18BQ9Y676 258 aaKnown RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 URB1O60287 2271 aaKnown RBP11.16□□□□□ -0.62
CPNE1-221ENST00000462352 SCN3AQ9NY46 2000 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 VSTM2BA6NLU5 285 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 CHST10O43529 356 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 B3GALT2O43825 422 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 SNNO75324 88 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 KLF7O75840 302 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 SNUPNO95149 360 aaKnown RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 SCELO95171 688 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 CHEK2O96017 543 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 CD63P08962 238 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ZGLP1P0C6A0 271 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 WT1P19544 449 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 HIST1H1TP22492 207 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ATP5A1P25705 553 aaKnown RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 ITPKBP27987 946 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 BSGP35613 385 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 SSR2P43308 183 aa11.15□□□□□ -0.62
CPNE1-221ENST00000462352 TSFMP43897 325 aaKnown RBP11.15□□□□□ -0.62
CPNE1-221ENST00000462352 XCR1P46094 333 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms