RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 POU1F1P28069 291 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 SERPINA4P29622 427 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 CCND3P30281 292 aaPredicted RBP17.69■□□□□ 0.42
HPS3-204ENST00000462030 AP1S2P56377 157 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 SLAMF1Q13291 335 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 SP140Q13342 867 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 ARMC4Q5T2S8 1044 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 GCNT6Q5T4J0 391 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 TPRG1Q6ZUI0 275 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 CAMKMTQ7Z624 323 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 FAM217AQ8IXS0 508 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 UPF1Q92900 1129 aaKnown RBP eCLIP17.69■□□□□ 0.42
HPS3-204ENST00000462030 COQ8BQ96D53 544 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 MED8Q96G25 268 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 SYT17Q9BSW7 474 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 ARHGAP39Q9C0H5 1083 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 C3orf14Q9HBI5 128 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 PLSCR3Q9NRY6 295 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 HCN4Q9Y3Q4 1203 aa17.69■□□□□ 0.42
HPS3-204ENST00000462030 ZAR1LA6NP61 321 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 SCO2O43819 266 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 UGT2B17O75795 530 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 XCR1P46094 333 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 ASMTP46597 345 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 LIMS1P48059 325 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 TUFMP49411 452 aaKnown RBP17.68■□□□□ 0.42
HPS3-204ENST00000462030 TAB1Q15750 504 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 TBRG1Q3YBR2 411 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 RNF130Q86XS8 419 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 RAB43Q86YS6 212 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 SETD6Q8TBK2 473 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 VPS35Q96QK1 796 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 IL4I1Q96RQ9 567 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 LYSMD1Q96S90 227 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 PHOX2BQ99453 314 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 SLC35A5Q9BS91 424 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 TTYH2Q9BSA4 534 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 TRIM39Q9HCM9 518 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 ASAH2Q9NR71 780 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 CLN6Q9NWW5 311 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 CLEC2DQ9UHP7 191 aa17.68■□□□□ 0.42
HPS3-204ENST00000462030 CENPXA8MT69 81 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 TFECO14948 347 aaPredicted RBP17.67■□□□□ 0.42
HPS3-204ENST00000462030 UGDHO60701 494 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 GADD45GO95257 159 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 C6orf47O95873 294 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 IGSF6O95976 241 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 GASTP01350 101 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 GBAP04062 536 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 DDOSTP39656 456 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 HNF4AP41235 474 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 NKX3-2P78367 333 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 CDK10Q15131 360 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 CLPPQ16740 277 aaPredicted RBP17.67■□□□□ 0.42
HPS3-204ENST00000462030 CCSMST1Q4G0I0 132 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.67■□□□□ 0.42
HPS3-204ENST00000462030 GALNT12Q8IXK2 581 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 OR5AK3PQ8NH89 298 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 ADAMTS19Q8TE59 1207 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 MAGEB10Q96LZ2 347 aaPredicted RBP17.67■□□□□ 0.42
HPS3-204ENST00000462030 SAMD11Q96NU1 681 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 OR4K3Q96R72 315 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 PIP5K1AQ99755 562 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 BRD9Q9H8M2 597 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 C11orf16Q9NQ32 467 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 SNTG1Q9NSN8 517 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 PCDHGB2Q9Y5G2 931 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 HTTP42858 3142 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 SH3D21A4FU49 640 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 A8MVJ9 347 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 RNASET2O00584 256 aaKnown RBP17.67■□□□□ 0.42
HPS3-204ENST00000462030 SLC16A5O15375 505 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 ENTPD6O75354 484 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 GALTP07902 379 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 ATP1B2P14415 290 aaPredicted RBP17.67■□□□□ 0.42
HPS3-204ENST00000462030 NAE1Q13564 534 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 CIDECQ96AQ7 238 aaPredicted RBP17.67■□□□□ 0.42
HPS3-204ENST00000462030 SCRN2Q96FV2 425 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 DEPDC7Q96QD5 511 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 MMP28Q9H239 520 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 NMNAT1Q9HAN9 279 aaPredicted RBP17.67■□□□□ 0.42
HPS3-204ENST00000462030 TIGARQ9NQ88 270 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 NINQ8N4C6 2090 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 CASP8AP2Q9UKL3 1982 aa17.67■□□□□ 0.42
HPS3-204ENST00000462030 A0A1W2PQ09 198 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 ARHGEF33A8MVX0 844 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 WWP2O00308 870 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 SCG5P05408 212 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 IL7P13232 177 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 ITGA2P17301 1181 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 FEN1P39748 380 aaKnown RBP17.66■□□□□ 0.42
HPS3-204ENST00000462030 STK19P49842 368 aaPredicted RBP17.66■□□□□ 0.42
HPS3-204ENST00000462030 CRISP1P54107 249 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 TAF12Q16514 161 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 LEXMQ3ZCV2 418 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 PLEKHS1Q5SXH7 462 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 GRHL2Q6ISB3 625 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 TMPRSS11AQ6ZMR5 421 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 HUS1BQ8NHY5 278 aa17.66■□□□□ 0.42
HPS3-204ENST00000462030 MAPKAP1Q9BPZ7 522 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms