RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 B3GAT2Q9NPZ5 323 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 NCDNQ9UBB6 729 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 RBPJLQ9UBG7 517 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 FER1L4A9Z1Z3 1794 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 METTL21EPA6NDL7 271 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 RAB39AQ14964 217 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 NPLOC4Q8TAT6 608 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 MMABQ96EY8 250 aaPredicted RBP18.98■□□□□ 0.63
SNX27-204ENST00000458013 CYP8B1Q9UNU6 501 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 HTR3EA5X5Y0 456 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 CLEC3AO75596 197 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 HMGN1P05114 100 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 GADD45AP24522 165 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 NPAS3Q8IXF0 933 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 NLGN4YQ8NFZ3 816 aaPredicted RBP18.98■□□□□ 0.63
SNX27-204ENST00000458013 FCRL3Q96P31 734 aaPredicted RBP18.98■□□□□ 0.63
SNX27-204ENST00000458013 C11orf49Q9H6J7 331 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 PROM1O43490 865 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 KDELR3O43731 214 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 BEST1O76090 585 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 SLC15A1P46059 708 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 TLE2Q04725 743 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 SLC25A44Q96H78 314 aaPredicted RBP18.98■□□□□ 0.63
SNX27-204ENST00000458013 C7orf34Q96L11 122 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 ZNF649Q9BS31 505 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 KCNH6Q9H252 994 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 Q9N2J8 555 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 ISPDA4D126 451 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 SOX30O94993 753 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 CPNE6O95741 557 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 GABRA3P34903 492 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 GRB7Q14451 532 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 RBM39Q14498 530 aaKnown RBP18.98■□□□□ 0.63
SNX27-204ENST00000458013 CILP2Q8IUL8 1156 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 ZNF283Q8N7M2 679 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 OR2AP1Q8NGE2 309 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 GNPDA2Q8TDQ7 276 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 C2orf15Q8WU43 125 aaKnown RBP18.98■□□□□ 0.63
SNX27-204ENST00000458013 SLC22A17Q8WUG5 538 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 USP29Q9HBJ7 922 aa18.98■□□□□ 0.63
SNX27-204ENST00000458013 A0A1B0GVI7 797 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 LEFTY2O00292 366 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.97■□□□□ 0.63
SNX27-204ENST00000458013 SOCS2O14508 198 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 HOXB2P14652 356 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 PON3Q15166 354 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 ALG10Q5BKT4 473 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 SLC39A4Q6P5W5 647 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 SLC30A2Q9BRI3 323 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 POLDIP3Q9BY77 421 aaKnown RBP18.97■□□□□ 0.63
SNX27-204ENST00000458013 DMAC2Q9NW81 257 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 ZIM2Q9NZV7 527 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 ACVR1BP36896 505 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 ST3GAL3Q11203 375 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 EXOC3L2Q2M3D2 409 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 FLYWCH1Q4VC44 716 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 AGTRAPQ6RW13 159 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 CAMK1GQ96NX5 476 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 P2RY13Q9BPV8 354 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 DLGAP4Q9Y2H0 992 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 CCDC163A0A0D9SF12 145 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 AQP12BA6NM10 295 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 PLSCR1O15162 318 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 COQ9O75208 318 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 RCBTB2O95199 551 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 ARHGAP1Q07960 439 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 SHFQ7M4L6 423 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 AQP12AQ8IXF9 295 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 EDDM13A0A1B0GTR0 161 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 SNAP29O95721 258 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 ABHD5Q8WTS1 349 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 STRA6Q9BX79 667 aa18.97■□□□□ 0.63
SNX27-204ENST00000458013 CNOT4O95628 575 aaKnown RBP18.96■□□□□ 0.63
SNX27-204ENST00000458013 GTF2F2P13984 249 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 HERV-K104P61576 105 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 E2F1Q01094 437 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 DRICH1Q6PGQ1 229 aaPredicted RBP18.96■□□□□ 0.63
SNX27-204ENST00000458013 RDH8Q9NYR8 311 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 TCRBV21S2A2A0A5A6 115 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 GLTPD2A6NH11 291 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 ZNF705EA8MWA4 302 aaPredicted RBP18.96■□□□□ 0.63
SNX27-204ENST00000458013 FAM72CH0Y354 149 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 BCKDHAP12694 445 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 ZNF182P17025 639 aaPredicted RBP18.96■□□□□ 0.63
SNX27-204ENST00000458013 IRF5Q13568 498 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 FAM72AQ5TYM5 149 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 FAM72DQ6L9T8 149 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 FAM72BQ86X60 149 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 ZNF675Q8TD23 568 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 S100A16Q96FQ6 103 aaKnown RBP18.96■□□□□ 0.63
SNX27-204ENST00000458013 RBM47A0AV96 593 aaKnown RBP18.96■□□□□ 0.63
SNX27-204ENST00000458013 YES1P07947 543 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 LCN1P31025 176 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 SAMD12Q8N8I0 201 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 NSMAFQ92636 917 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 SLC22A18Q96BI1 424 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 HSPB11Q9Y547 144 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 DISC1C4P0D8 188 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 GPRC6AQ5T6X5 926 aa18.96■□□□□ 0.63
SNX27-204ENST00000458013 OR13C3Q8NGS6 347 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms