RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 YIPF3Q9GZM5 350 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 AKIRIN1Q9H9L7 192 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 NOP53Q9NZM5 478 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 ERVK-18Q9QC07 812 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 MGAT4CQ9UBM8 478 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 DSEQ9UL01 958 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 EMCNQ9ULC0 261 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 PLLPQ9Y342 182 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 CHD7Q9P2D1 2997 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 A0A0A6YYJ9 748 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 SLC35F4A4IF30 521 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 FAM171A2A8MVW0 826 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 SLCO1B7G3V0H7 640 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 ANKRD28O15084 1053 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 CFLARO15519 480 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 B4GALT3O60512 393 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 NEBLO76041 1014 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 RHOBTB1O94844 696 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 JUNP05412 331 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 NMBRP28336 390 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 SERPINB5P36952 375 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 PREPP48147 710 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 THOP1P52888 689 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 MTTPP55157 894 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 ENPEPQ07075 957 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 ENPP2Q13822 863 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 TIGD5Q53EQ6 642 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 TMEM31Q5JXX7 168 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 RIPOR1Q6ZS17 1223 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 SH2D5Q6ZV89 423 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 TDRPQ86YL5 185 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 CCNYL1Q8N7R7 359 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 FADS6Q8N9I5 356 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 TMEM185AQ8NFB2 350 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 TOP1MTQ969P6 601 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 MAGED4Q96JG8 741 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 MEGF10Q96KG7 1140 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 SYT15Q9BQS2 421 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 SPATA16Q9BXB7 569 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 C20orf96Q9NUD7 363 aaPredicted RBP5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 SEMA5BQ9P283 1151 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 ENPP5Q9UJA9 477 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 UBQLN1Q9UMX0 589 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 ANK1P16157 1881 aa5.97□□□□□ -1.45
TRAPPC13-202ENST00000399438 SHROOM3Q8TF72 1996 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 A0A1W2PR77 199 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 C5orf52A6NGY3 159 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 DCXO43602 365 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 AKAP8O43823 692 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 DCTN3O75935 186 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 LRIG2O94898 1065 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 KDM4BO94953 1096 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 APOA1P02647 267 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 THBS1P07996 1170 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 GNAT1P11488 350 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 CCNB1P14635 433 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 CTRB1P17538 263 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 TGM2P21980 687 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 PTPN7P35236 360 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ARL1P40616 181 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 MATKP42679 507 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 RPS5P46782 204 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 TUBA4AP68366 448 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 CDK16Q00536 496 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 GSTM4Q03013 218 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 STX3Q13277 289 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 GPR176Q14439 515 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 PTPRRQ15256 657 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ZNF789Q5FWF6 425 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 C9orf50Q5SZB4 431 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 CTRB2Q6GPI1 263 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 GDF6Q6KF10 455 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 NDUFAF7Q7L592 441 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 MAVSQ7Z434 540 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 MFN1Q8IWA4 741 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 KBTBD2Q8IY47 623 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 RIBC1Q8N443 379 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ZBTB2Q8N680 514 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 TMIEQ8NEW7 156 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 MAPK15Q8TD08 544 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 NUDT8Q8WV74 236 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 SOCS4Q8WXH5 440 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ARNTL2Q8WYA1 636 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 LRMDAQ9H2I8 198 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 MTIF3Q9H2K0 278 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 FN3KRPQ9HA64 309 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 MRPL40Q9NQ50 206 aaKnown RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 CLDND1Q9NY35 253 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 STAP1Q9ULZ2 295 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 NCKAP1Q9Y2A7 1128 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 LRRC42Q9Y546 428 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ACTL7BQ9Y614 415 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 CEP290O15078 2479 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 OR51F1A6NGY5 319 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ZNF701M0R085 212 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 PIRO00625 290 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 GSC2O15499 205 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 TLX3O43711 291 aaPredicted RBP5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 S1PR4O95977 384 aa5.96□□□□□ -1.46
TRAPPC13-202ENST00000399438 ACP5P13686 325 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms