RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 RECQL5O94762 991 aaPredicted RBP0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 DUSP14O95147 198 aaKnown RBP0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 RTN3O95197 1032 aaPredicted RBP0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 IGKV4-1P06312 121 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 SFTPDP35247 375 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 IRF3Q14653 427 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 HERPUD1Q15011 391 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 PTGES3Q15185 160 aaKnown RBP0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 CCDC14Q49A88 953 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 LIPJQ5W064 366 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 Q5W150 140 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 C2orf66Q6UXQ4 117 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 RNF182Q8N6D2 247 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 ANKRD42Q8N9B4 389 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 RASGEF1AQ8N9B8 481 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 XXYLT1Q8NBI6 393 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 MARCH1Q8TCQ1 289 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 VN1R17PQ8TDU5 208 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 PAFAH2Q99487 392 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 VCXQ9H320 206 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 ACTL8Q9H568 366 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 GSN-AS1Q9NRJ2 163 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 SAGE1Q9NXZ1 904 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 STK26Q9P289 416 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 RNF24Q9Y225 148 aa0.48□□□□□ -2.33
RNU6-239P-201ENST00000390990 IGLV4-60A0A075B6I1 120 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 MFSD2BA6NFX1 497 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 RPS6KA5O75582 802 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 ANGPTL1O95841 491 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 LDHAP00338 332 aaKnown RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 SERPING1P05155 500 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 YES1P07947 543 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 RAB40ALP0C0E4 278 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 LAMP2P13473 410 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 TRIM21P19474 475 aaKnown RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 GARSP41250 739 aaKnown RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 SLC1A6P48664 564 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 LHX1P48742 406 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 EVCP57679 992 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 MEF2BQ02080 365 aaPredicted RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 FUT7Q11130 342 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 RALGDSQ12967 914 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 PRR4Q16378 134 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 PPP1R3AQ16821 1122 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 IGSF11Q5DX21 431 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 SNX30Q5VWJ9 437 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 TEX26Q8N6G2 289 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 SCFD2Q8WU76 684 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 PTPMT1Q8WUK0 201 aaPredicted RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 RFFLQ8WZ73 363 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 TADA1Q96BN2 335 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 NXNL1Q96CM4 212 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 SPACA9Q96E40 222 aaPredicted RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 SEPHS2Q99611 448 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 PINK1Q9BXM7 581 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 ITPAQ9BY32 194 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 ING2Q9H160 280 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 RIMS4Q9H426 269 aaPredicted RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 CUEDC2Q9H467 287 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 JMJD4Q9H9V9 463 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 PPCSQ9HAB8 311 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 CDH20Q9HBT6 801 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 UBN1Q9NPG3 1134 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 SLC35C2Q9NQQ7 365 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 UBQLN2Q9UHD9 624 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 ZNF223Q9UK11 482 aaPredicted RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 CRYL1Q9Y2S2 319 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 HBS1LQ9Y450 684 aaKnown RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 LRRFIP2Q9Y608 721 aaKnown RBP0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 RPS6KL1Q9Y6S9 549 aa0.47□□□□□ -2.33
RNU6-239P-201ENST00000390990 RAI1Q7Z5J4 1906 aaPredicted RBP0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 TRAV24A0A0B4J272 114 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 OR2A25A4D2G3 310 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 A8MX80 341 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 TCP10L2B9ZVM9 353 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 MCF2LO15068 1137 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 ADAMDEC1O15204 470 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 TMEM63AO94886 807 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 GSRP00390 522 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 DNTTP04053 509 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 CSN3P07498 182 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 CHMP24386 653 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 RPA1P27694 616 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 HTR1FP30939 366 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 CCT5P48643 541 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 KRT79Q5XKE5 535 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 NEPROQ6NW34 567 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 DHRS11Q6UWP2 260 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 TBC1D10CQ8IV04 446 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 BEST4Q8NFU0 473 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 ZNF671Q8TAW3 534 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 FBXO30Q8TB52 745 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 PROX1Q92786 737 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 MOB3AQ96BX8 217 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 SAT2Q96F10 170 aaPredicted RBP0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 RBM41Q96IZ5 413 aaKnown RBP0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 PLEKHF1Q96S99 279 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 KIR2DL4Q99706 377 aa0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 FTOQ9C0B1 505 aaKnown RBP eCLIP0.46□□□□□ -2.34
RNU6-239P-201ENST00000390990 GPR88Q9GZN0 384 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms