RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 RASGRP3Q8IV61 690 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 WDR20Q8TBZ3 569 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 UBASH3BQ8TF42 649 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 APH1BQ8WW43 257 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 PMEPA1Q969W9 287 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 C7orf34Q96L11 122 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 KRT84Q9NSB2 600 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 FKBP14Q9NWM8 211 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 THUMPD1Q9NXG2 353 aaKnown RBP13.3□□□□□ -0.28
SF1-205ENST00000377394 GRIP1Q9Y3R0 1128 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 MICAL3Q7RTP6 2002 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 A0A0B4J293 547 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 MRPS14O60783 128 aaKnown RBP13.3□□□□□ -0.28
SF1-205ENST00000377394 LAMP1P11279 417 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 COX7A2P14406 83 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 UGT2B15P54855 530 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 SNRPD1P62314 119 aaKnown RBP13.3□□□□□ -0.28
SF1-205ENST00000377394 SF1Q15637 639 aaKnown RBP13.3□□□□□ -0.28
SF1-205ENST00000377394 PLEKHS1Q5SXH7 462 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 PDE12Q6L8Q7 609 aaKnown RBP13.3□□□□□ -0.28
SF1-205ENST00000377394 DPY19L3Q6ZPD9 716 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 SLC46A3Q7Z3Q1 461 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 FBXL6Q8N531 539 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 RNF31Q96EP0 1072 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 C11orf24Q96F05 449 aaPredicted RBP13.3□□□□□ -0.28
SF1-205ENST00000377394 SCLYQ96I15 445 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 LMLNQ96KR4 655 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 UCK2Q9BZX2 261 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 CHST8Q9H2A9 424 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 FAM120CQ9NX05 1096 aaKnown RBP13.3□□□□□ -0.28
SF1-205ENST00000377394 TEKT2Q9UIF3 430 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 POLHQ9Y253 713 aa13.3□□□□□ -0.28
SF1-205ENST00000377394 TMEM229AB2RXF0 380 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 BNIP3LO60238 219 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 CSF2P04141 144 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 NUDT7P0C024 238 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 HSMCR30P0CW71 290 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 ATP1B2P14415 290 aaPredicted RBP13.29□□□□□ -0.28
SF1-205ENST00000377394 ITGA2P17301 1181 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 EFNA1P20827 205 aaPredicted RBP13.29□□□□□ -0.28
SF1-205ENST00000377394 TNFSF8P32971 234 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 SLC19A1P41440 591 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 SPINT3P49223 89 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 AP1S2P56377 157 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 C21orf58P58505 322 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 RPP38P78345 283 aaKnown RBP13.29□□□□□ -0.28
SF1-205ENST00000377394 SP3Q02447 781 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 CSTF3Q12996 717 aaKnown RBP13.29□□□□□ -0.28
SF1-205ENST00000377394 MADCAM1Q13477 382 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 RAB33AQ14088 237 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 VEZF1Q14119 521 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 PROX2Q3B8N5 592 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 LRRC73Q5JTD7 316 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 ATG16L2Q8NAA4 619 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 CEP19Q96LK0 163 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 SLC30A2Q9BRI3 323 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 COPS4Q9BT78 406 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 REEP1Q9H902 201 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 CCNB1IP1Q9NPC3 277 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 SPATA6Q9NWH7 488 aaPredicted RBP13.29□□□□□ -0.28
SF1-205ENST00000377394 VPS29Q9UBQ0 182 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 CD84Q9UIB8 345 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 PCDHB11Q9Y5F2 797 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 INSL5Q9Y5Q6 135 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 A3GALT2U3KPV4 340 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 LEUTXA8MZ59 168 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 SMLR1H3BR10 107 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 DPM1O60762 260 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 TSPAN9O75954 239 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 TPPPO94811 219 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 VIPP01282 170 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 RPLP0P05388 317 aaKnown RBP13.29□□□□□ -0.28
SF1-205ENST00000377394 EPHB3P54753 998 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 NPRL3Q12980 569 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 TARDBPQ13148 414 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■□□□ 12.3
SF1-205ENST00000377394 TRIM60Q495X7 471 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 MPPE1Q53F39 396 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 LIPJQ5W064 366 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 HTR3DQ70Z44 454 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 CPXM2Q8N436 756 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 DEDD2Q8WXF8 326 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 TTC9Q92623 222 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 MAGEB10Q96LZ2 347 aaPredicted RBP13.29□□□□□ -0.28
SF1-205ENST00000377394 TPT1P8Q9HAU6 139 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 TIGARQ9NQ88 270 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 CFAP97Q9P2B7 532 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 KIF17Q9P2E2 1029 aa13.29□□□□□ -0.28
SF1-205ENST00000377394 KIAA1671Q9BY89 1806 aa13.28□□□□□ -0.28
SF1-205ENST00000377394 SGTAO43765 313 aa13.28□□□□□ -0.28
SF1-205ENST00000377394 NOS1APO75052 506 aaPredicted RBP13.28□□□□□ -0.28
SF1-205ENST00000377394 MTX2O75431 263 aa13.28□□□□□ -0.28
SF1-205ENST00000377394 C9P02748 559 aa13.28□□□□□ -0.28
SF1-205ENST00000377394 CYP2A6P11509 494 aaPredicted RBP13.28□□□□□ -0.28
SF1-205ENST00000377394 GLULP15104 373 aa13.28□□□□□ -0.28
SF1-205ENST00000377394 NAGAP17050 411 aa13.28□□□□□ -0.28
SF1-205ENST00000377394 POU3F3P20264 500 aaPredicted RBP13.28□□□□□ -0.28
SF1-205ENST00000377394 PTGS2P35354 604 aa13.28□□□□□ -0.28
SF1-205ENST00000377394 HNF4AP41235 474 aa13.28□□□□□ -0.28
SF1-205ENST00000377394 NUDT6P53370 316 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms