RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SPIN4Q56A73 249 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 ANXA8L1Q5VT79 327 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 HIST2H2AA3Q6FI13 130 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 TTC23LQ6PF05 361 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 NEK10Q6ZWH5 1172 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 CCDC103Q8IW40 242 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 REM2Q8IYK8 340 aaPredicted RBP16.33■□□□□ 0.21
RXRB-201ENST00000374680 VANGL1Q8TAA9 524 aaPredicted RBP16.33■□□□□ 0.21
RXRB-201ENST00000374680 APH1BQ8WW43 257 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 SLC5A11Q8WWX8 675 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 PRAP1Q96NZ9 151 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 OSGEPL1Q9H4B0 414 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 DUSP21Q9H596 190 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 PCDHGB3Q9Y5G1 929 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 LYVE1Q9Y5Y7 322 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 MYO10Q9HD67 2058 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 MYO15AQ9UKN7 3530 aa16.33■□□□□ 0.21
RXRB-201ENST00000374680 GLOD5A6NK44 160 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 JRKO75564 520 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 IGFBP1P08833 259 aaPredicted RBP16.33■□□□□ 0.2
RXRB-201ENST00000374680 STSP08842 583 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 CLK1P49759 484 aaKnown RBP16.33■□□□□ 0.2
RXRB-201ENST00000374680 MVDP53602 400 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 PRMT2P55345 433 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 ITGA1P56199 1179 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 GABARAPL2P60520 117 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 CDK6Q00534 326 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 KCNC3Q14003 757 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 DUSP7Q16829 419 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 GCNT6Q5T4J0 391 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 EXOSC8Q96B26 276 aaKnown RBP16.33■□□□□ 0.2
RXRB-201ENST00000374680 COX4I2Q96KJ9 171 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 C19orf43Q9BQ61 176 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 XKR8Q9H6D3 395 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 CCDC177Q9NQR7 707 aaPredicted RBP16.33■□□□□ 0.2
RXRB-201ENST00000374680 DAPK2Q9UIK4 370 aa16.33■□□□□ 0.2
RXRB-201ENST00000374680 UGDHO60701 494 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 DBTP11182 482 aaKnown RBP16.32■□□□□ 0.2
RXRB-201ENST00000374680 DCDC1P59894 354 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 SPPL3Q8TCT6 385 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 ZBTB20Q9HC78 741 aaPredicted RBP16.32■□□□□ 0.2
RXRB-201ENST00000374680 FAIMQ9NVQ4 179 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 TRNAU1APQ9NX07 287 aaKnown RBP16.32■□□□□ 0.2
RXRB-201ENST00000374680 PRMT3O60678 531 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 SOX14O95416 240 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 FURINP09958 794 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 LIPAP38571 399 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 NXPE4Q6UWF7 544 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 TMIGD1Q6UXZ0 262 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 TSPYL5Q86VY4 417 aaPredicted RBP16.32■□□□□ 0.2
RXRB-201ENST00000374680 ANKRD13BQ86YJ7 626 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.32■□□□□ 0.2
RXRB-201ENST00000374680 COQ8BQ96D53 544 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 IL4I1Q96RQ9 567 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 TCF20Q9UGU0 1960 aaKnown RBP16.32■□□□□ 0.2
RXRB-201ENST00000374680 KLHL18O94889 574 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 PCDH8O95206 1070 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 FGBP02675 491 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 CISD3P0C7P0 127 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 PNLIPRP1P54315 467 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 INAQ16352 499 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 ZNF554Q86TJ5 538 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 MEX3DQ86XN8 651 aaKnown RBP16.32■□□□□ 0.2
RXRB-201ENST00000374680 BADQ92934 168 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 LGALS12Q96DT0 336 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 FCRL1Q96LA6 429 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 BRF2Q9HAW0 419 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 DYRK4Q9NR20 520 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 ZNF282Q9UDV7 671 aaPredicted RBP16.32■□□□□ 0.2
RXRB-201ENST00000374680 INSL6Q9Y581 213 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 OR1A2Q9Y585 309 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 PMF1-BGLAPU3KQ54 211 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 DENND4CQ5VZ89 1909 aa16.32■□□□□ 0.2
RXRB-201ENST00000374680 TRPM6Q9BX84 2022 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 GRXCR1A8MXD5 290 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 PRKRAO75569 313 aaKnown RBP16.31■□□□□ 0.2
RXRB-201ENST00000374680 SEMG1P04279 462 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 EPHX1P07099 455 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 PRKAG1P54619 331 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 VEZF1Q14119 521 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 DMC1Q14565 340 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 TRIM16LQ309B1 348 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 ZC3H12BQ5HYM0 836 aaKnown RBP16.31■□□□□ 0.2
RXRB-201ENST00000374680 RBM45Q8IUH3 476 aaKnown RBP16.31■□□□□ 0.2
RXRB-201ENST00000374680 AMER3Q8N944 861 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 YIPF4Q9BSR8 244 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 BTNL2Q9UIR0 455 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 FAM32AQ9Y421 112 aaKnown RBP16.31■□□□□ 0.2
RXRB-201ENST00000374680 HEPACAM2A8MVW5 462 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 IL1RNP18510 177 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 RGS21Q2M5E4 152 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 IFI44LQ53G44 452 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 JPH3Q8WXH2 748 aaPredicted RBP16.31■□□□□ 0.2
RXRB-201ENST00000374680 TFGQ92734 400 aaPredicted RBP16.31■□□□□ 0.2
RXRB-201ENST00000374680 ZDHHC5Q9C0B5 715 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 CHST8Q9H2A9 424 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 RERGLQ9H628 205 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 CXorf36Q9H7Y0 433 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 IMPAD1Q9NX62 359 aa16.31■□□□□ 0.2
RXRB-201ENST00000374680 PLXND1Q9Y4D7 1925 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms