RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 SUV39H2Q9H5I1 410 aa17.35■□□□□ 0.37
CTSB-202ENST00000353047 TRPS1Q9UHF7 1281 aa17.35■□□□□ 0.37
CTSB-202ENST00000353047 AP3M1Q9Y2T2 418 aa17.35■□□□□ 0.37
CTSB-202ENST00000353047 HSPB11Q9Y547 144 aa17.35■□□□□ 0.37
CTSB-202ENST00000353047 TLR4O00206 839 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 MEN1O00255 615 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 PLK4O00444 970 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 SYN3O14994 580 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 NUAK1O60285 661 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 ENTPD6O75354 484 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 AP1S1P61966 158 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 OLR1P78380 273 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 GAB1Q13480 694 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 C1QTNF12Q5T7M4 302 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 MFSD4AQ8N468 514 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 PEX13Q92968 403 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 MACROD1Q9BQ69 325 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 TRMT61BQ9BVS5 477 aaKnown RBP17.34■□□□□ 0.37
CTSB-202ENST00000353047 ANGPT4Q9Y264 503 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 CFL2Q9Y281 166 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 PCDHGA6Q9Y5G7 932 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 NOX1Q9Y5S8 564 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 SPTBP11277 2137 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 A0A1W2PQ09 198 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 C8orf89P0DMQ9 161 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 AMD1P17707 334 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 PCMT1P22061 227 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 TGM1P22735 817 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 HBA1P69905 142 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 ACVR1Q04771 509 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 GBX1Q14549 363 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 ASCC1Q8N9N2 400 aaKnown RBP17.34■□□□□ 0.37
CTSB-202ENST00000353047 GATAD2BQ8WXI9 593 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 SLC9A6Q92581 669 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 ZNF300Q96RE9 604 aaPredicted RBP17.34■□□□□ 0.37
CTSB-202ENST00000353047 TRIM45Q9H8W5 580 aaPredicted RBP17.34■□□□□ 0.37
CTSB-202ENST00000353047 B3GNT3Q9Y2A9 372 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 YARS2Q9Y2Z4 477 aaKnown RBP17.34■□□□□ 0.37
CTSB-202ENST00000353047 PCDHB11Q9Y5F2 797 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 ATP1B2P14415 290 aaPredicted RBP17.34■□□□□ 0.37
CTSB-202ENST00000353047 PDHA2P29803 388 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 LMAN2Q12907 356 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 PIN1Q13526 163 aaPredicted RBP17.34■□□□□ 0.37
CTSB-202ENST00000353047 RGNQ15493 299 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 LRIT3Q3SXY7 679 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 ATAT1Q5SQI0 421 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 GLCCI1Q86VQ1 547 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 OR2AP1Q8NGE2 309 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 AP2M1Q96CW1 435 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 FNDC11Q9BVV2 318 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 HDHD5Q9BXW7 423 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 OR2AG1Q9H205 316 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 YIPF1Q9Y548 306 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 CCDC88CQ9P219 2028 aa17.34■□□□□ 0.37
CTSB-202ENST00000353047 H3BSH0 61 aa17.33■□□□□ 0.37
CTSB-202ENST00000353047 SCN1BQ07699 218 aa17.33■□□□□ 0.37
CTSB-202ENST00000353047 MAP4K2Q12851 820 aa17.33■□□□□ 0.37
CTSB-202ENST00000353047 CBX2Q14781 532 aaPredicted RBP17.33■□□□□ 0.37
CTSB-202ENST00000353047 FNIP2Q9P278 1114 aa17.33■□□□□ 0.37
CTSB-202ENST00000353047 RGPD3A6NKT7 1758 aaPredicted RBP17.33■□□□□ 0.37
CTSB-202ENST00000353047 RGPD4Q7Z3J3 1758 aa17.33■□□□□ 0.37
CTSB-202ENST00000353047 WBP4O75554 376 aaKnown RBP17.33■□□□□ 0.36
CTSB-202ENST00000353047 ALDH1A1P00352 501 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 ANXA8P13928 327 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 XKP51811 444 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 SMU1Q2TAY7 513 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 ARSIQ5FYB1 569 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 SYT6Q5T7P8 510 aaPredicted RBP17.33■□□□□ 0.36
CTSB-202ENST00000353047 MTFR2Q6P444 385 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 OR8H1Q8NGG4 311 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 POF1BQ8WVV4 589 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 RNFT2Q96EX2 444 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 TM9SF2Q99805 663 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 DUSP21Q9H596 190 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 MRPL17Q9NRX2 175 aaKnown RBP17.33■□□□□ 0.36
CTSB-202ENST00000353047 SPATA2Q9UM82 520 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 MKI67P46013 3256 aaKnown RBP17.33■□□□□ 0.36
CTSB-202ENST00000353047 A0A1W2PPK0 400 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 SLC16A6O15403 523 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 GALTP07902 379 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 ACLYP53396 1101 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 LRRC26Q2I0M4 334 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 SPATS1Q496A3 300 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 CEP78Q5JTW2 689 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 MRPL10Q7Z7H8 261 aaKnown RBP17.33■□□□□ 0.36
CTSB-202ENST00000353047 PIGKQ92643 395 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 ARSGQ96EG1 525 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 SMURF1Q9HCE7 757 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 NLKQ9UBE8 527 aa17.33■□□□□ 0.36
CTSB-202ENST00000353047 IGLV3-10A0A075B6K4 115 aa17.32■□□□□ 0.36
CTSB-202ENST00000353047 OR2A25A4D2G3 310 aa17.32■□□□□ 0.36
CTSB-202ENST00000353047 GLTPD2A6NH11 291 aa17.32■□□□□ 0.36
CTSB-202ENST00000353047 CPSF4LA6NMK7 179 aaKnown RBP17.32■□□□□ 0.36
CTSB-202ENST00000353047 CSTF2P33240 577 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTSB-202ENST00000353047 HOXC5Q00444 222 aa17.32■□□□□ 0.36
CTSB-202ENST00000353047 OR2G6Q5TZ20 316 aa17.32■□□□□ 0.36
CTSB-202ENST00000353047 KDM4DQ6B0I6 523 aa17.32■□□□□ 0.36
CTSB-202ENST00000353047 MED27Q6P2C8 311 aa17.32■□□□□ 0.36
CTSB-202ENST00000353047 FAM20CQ8IXL6 584 aa17.32■□□□□ 0.36
CTSB-202ENST00000353047 ISG20Q96AZ6 181 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms