RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 MAGED4Q96JG8 741 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 APOL4Q9BPW4 351 aa18.12■□□□□ 0.49
RFTN1-201ENST00000334133 EDDM13A0A1B0GTR0 161 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 A0A1W2PRB8 838 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 WASHC1A8K0Z3 465 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 PSMD11O00231 422 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 SERPIND1P05546 499 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 LCKP06239 509 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 PCGF2P35227 344 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 SLC35A2P78381 396 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 TUBA3CQ13748 450 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 RPS26P11Q5JNZ5 115 aaPredicted RBP18.11■□□□□ 0.49
RFTN1-201ENST00000334133 WASH2PQ6VEQ5 465 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 ERN2Q76MJ5 926 aaKnown RBP18.11■□□□□ 0.49
RFTN1-201ENST00000334133 LAS2Q8IYD9 372 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 NLGN4XQ8N0W4 816 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 WFIKKN2Q8TEU8 576 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 RPL3LQ92901 407 aaKnown RBP18.11■□□□□ 0.49
RFTN1-201ENST00000334133 PRKAG2Q9UGJ0 569 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 SLC27A6Q9Y2P4 619 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 SNX11Q9Y5W9 270 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 H7BY64 318 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 PPM1DO15297 605 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 WBP4O75554 376 aaKnown RBP18.11■□□□□ 0.49
RFTN1-201ENST00000334133 PCDH8O95206 1070 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 C21orf58P58505 322 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 ATP1A4Q13733 1029 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 CTF1Q16619 201 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 GCNT6Q5T4J0 391 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 TNFAIP8L2Q6P589 184 aaPredicted RBP18.11■□□□□ 0.49
RFTN1-201ENST00000334133 SNX29P2Q8IUI4 249 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 OR2L2Q8NH16 312 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 GIPC3Q8TF64 312 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 DNASE1L2Q92874 299 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 PRAP1Q96NZ9 151 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 NIPSNAP1Q9BPW8 284 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 ALOXE3Q9BYJ1 711 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 BHLHE41Q9C0J9 482 aaPredicted RBP18.11■□□□□ 0.49
RFTN1-201ENST00000334133 OR52A5Q9H2C5 316 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 SCN3BQ9NY72 215 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 ATP6V1HQ9UI12 483 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 SLC6A14Q9UN76 642 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 LYVE1Q9Y5Y7 322 aa18.11■□□□□ 0.49
RFTN1-201ENST00000334133 FAM227AF5H4B4 570 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 TNFRSF21O75509 655 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 CAMKMTQ7Z624 323 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 ENTHD1Q8IYW4 607 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 SUSD6Q92537 303 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 FGF13Q92913 245 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 PLEKHA8Q96JA3 519 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 MACROD1Q9BQ69 325 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.1■□□□□ 0.49
RFTN1-201ENST00000334133 PRAMEF33A0A0G2JMD5 474 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 TRIM64BA6NI03 449 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 PRAMEF10O60809 474 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 INHBBP09529 407 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 ITIH1P19827 911 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 C21orf33P30042 268 aaPredicted RBP18.1■□□□□ 0.49
RFTN1-201ENST00000334133 IL18R1Q13478 541 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 EXOC3L2Q2M3D2 409 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 FAM71E1Q6IPT2 247 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 AMZ2Q86W34 360 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 FBLIM1Q8WUP2 373 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 APH1BQ8WW43 257 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 PROX1Q92786 737 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 RAB8BQ92930 207 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 GTPBP3Q969Y2 492 aaKnown RBP18.1■□□□□ 0.49
RFTN1-201ENST00000334133 OSGEPL1Q9H4B0 414 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 TAAR2Q9P1P5 351 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 ENPP5Q9UJA9 477 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 TPRKBQ9Y3C4 175 aa18.1■□□□□ 0.49
RFTN1-201ENST00000334133 SH3PXD2BA1X283 911 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 GPR37L1O60883 481 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 CDK6Q00534 326 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 PPIGQ13427 754 aaKnown RBP eCLIP18.09■□□□□ 0.49
RFTN1-201ENST00000334133 KEAP1Q14145 624 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 FAHD1Q6P587 224 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 SZRD1Q7Z422 152 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 HMGN2P46Q86SG4 172 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 KLHDC8AQ8IYD2 350 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 ANKRD53Q8N9V6 530 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 SP7Q8TDD2 431 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-201ENST00000334133 UTP15Q8TED0 518 aaKnown RBP18.09■□□□□ 0.49
RFTN1-201ENST00000334133 OTUB1Q96FW1 271 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-201ENST00000334133 EPHX3Q9H6B9 360 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 XKR8Q9H6D3 395 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 GPN2Q9H9Y4 310 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-201ENST00000334133 SLAMF7Q9NQ25 335 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 ITM2CQ9NQX7 267 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 C1GALT1Q9NS00 363 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 ATAD3AQ9NVI7 634 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 TAS2R9Q9NYW1 312 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 PCDHGB3Q9Y5G1 929 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 PCDHGA6Q9Y5G7 932 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 PRUNE2Q8WUY3 3088 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 FOXE1O00358 373 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-201ENST00000334133 PLPP1O14494 284 aa18.09■□□□□ 0.49
RFTN1-201ENST00000334133 TBX6O95947 436 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-201ENST00000334133 TPP2P29144 1249 aaPredicted RBP18.09■□□□□ 0.49
RFTN1-201ENST00000334133 NCS1P62166 190 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms