RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CELF5Q8N6W0 485 aaKnown RBP12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 RASGEF1AQ8N9B8 481 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 B3GNT7Q8NFL0 401 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 POFUT2Q9Y2G5 429 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 CCDC88CQ9P219 2028 aa12.37□□□□□ -0.43
HMGCS1-201ENST00000325110 SCAMP1O15126 338 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 RFPL2O75678 378 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ALPPL2P10696 532 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ITGA2P17301 1181 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 JUNDP17535 347 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 PTNP21246 168 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 IMPA1P29218 277 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 CNR2P34972 360 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 CXCR4P61073 352 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 CDKN3Q16667 212 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 DESI1Q6ICB0 168 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 CEACAM20Q6UY09 585 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 BCDIN3DQ7Z5W3 292 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 METTL3Q86U44 580 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 DNAJC22Q8N4W6 341 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 XAGE5Q8WWM1 108 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 TCEAL4Q96EI5 215 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 MGLLQ99685 303 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 REEP4Q9H6H4 257 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 HSPE1-MOB4S4R3N1 261 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 FADS2P1A8MWK0 482 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ZW10O43264 779 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 TGM5O43548 720 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 SGTAO43765 313 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 MPC1LP0DKB6 136 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ADORA3P0DMS8 318 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 HOXB6P17509 224 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 RCVRNP35243 200 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 TLE2Q04725 743 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 CNTN1Q12860 1018 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 KCNJ8Q15842 424 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 GGTA1PQ4G0N0 100 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ASTLQ6HA08 431 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 CCBE1Q6UXH8 406 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 OLIG3Q7RTU3 272 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 GALNT13Q8IUC8 556 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 OR8J2Q8NGG1 315 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 OR9Q1Q8NGQ5 310 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 APH1BQ8WW43 257 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 FCGR1BQ92637 280 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 VMP1Q96GC9 406 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 HRASLS5Q96KN8 279 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 COL21A1Q96P44 957 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 YIPF4Q9BSR8 244 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 MMP27Q9H306 513 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 OSGEPL1Q9H4B0 414 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 IL21Q9HBE4 155 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 CASP8AP2Q9UKL3 1982 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 PRAMEF33A0A0G2JMD5 474 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 PRMT3O60678 531 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 PRAMEF10O60809 474 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 UPK1BO75841 260 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 CXCL14O95715 111 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 IGFBP1P08833 259 aaPredicted RBP12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ACRP10323 421 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 VIPR1P32241 457 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 GRK5P34947 590 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 SOX3P41225 446 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 SP140Q13342 867 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 VEZF1Q14119 521 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 IQCCQ4KMZ1 466 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 SPIN4Q56A73 249 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 TYW3Q6IPR3 259 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ERAP2Q6P179 960 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ZNF480Q8WV37 535 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 ZNF566Q969W8 418 aa12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 TRMT2BQ96GJ1 504 aaKnown RBP12.36□□□□□ -0.43
HMGCS1-201ENST00000325110 FNDC1Q4ZHG4 1894 aaPredicted RBP12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 AGAP5A6NIR3 686 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 SCN2BO60939 215 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 PSMA3P25788 255 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 DEFB103AP81534 67 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 RAB33AQ14088 237 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 PTGES3Q15185 160 aaKnown RBP12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 ATAD3BQ5T9A4 648 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 OR52E4Q8NGH9 312 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 POP5Q969H6 163 aaKnown RBP12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 GLYATL1Q969I3 302 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 REPS1Q96D71 796 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 C7orf34Q96L11 122 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 RNF208Q9H0X6 261 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 TVP23BQ9NYZ1 205 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 PSORS1C1Q9UIG5 152 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 HTR3EA5X5Y0 456 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 CDK1P06493 297 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 ALDH6A1Q02252 535 aaKnown RBP12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 MTAPQ13126 283 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 GRHL2Q6ISB3 625 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 SYNPOQ8N3V7 929 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 CAMKK1Q8N5S9 505 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 OR2A12Q8NGT7 310 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 NRTNQ99748 197 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 IFT52Q9Y366 437 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 HCN4Q9Y3Q4 1203 aa12.35□□□□□ -0.43
HMGCS1-201ENST00000325110 CKAP5Q14008 2032 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms