RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 LZTS3O60299 673 aaPredicted RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 APOA1P02647 267 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 IL3P08700 152 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 POLR2EP19388 210 aaKnown RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 IDSP22304 550 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 CST5P28325 142 aaPredicted RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 IMPA1P29218 277 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 PPP5CP53041 499 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 POLR2LP62875 67 aaKnown RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 DBPQ10586 325 aaPredicted RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 PRRG3Q9BZD7 231 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 TIGARQ9NQ88 270 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 CKAP5Q14008 2032 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 SDK1Q7Z5N4 2213 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 A0A1W2PRB8 838 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 K7ESM1 405 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 NUAK1O60285 661 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 ATG13O75143 517 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 GSTM1P09488 218 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 ADORA3P0DMS8 318 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 DUSP7Q16829 419 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 C10orf62Q5T681 223 aaPredicted RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 CCBE1Q6UXH8 406 aaPredicted RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 FAM124AQ86V42 546 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 RBM45Q8IUH3 476 aaKnown RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 CYP4Z2PQ8N1L4 340 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 ELMOD1Q8N336 334 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 L3MBTL4Q8NA19 623 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 UBTD2Q8WUN7 234 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 XAGE5Q8WWM1 108 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 ATL1Q8WXF7 558 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 ELAC1Q9H777 363 aaKnown RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 IL21Q9HBE4 155 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 QPCTLQ9NXS2 382 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 HCFC2Q9Y5Z7 792 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 CCDC88CQ9P219 2028 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 CLCA1A8K7I4 914 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 GRM6O15303 877 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 TPD52L2O43399 206 aaKnown RBP12.95□□□□□ -0.34
VHL-201ENST00000256474 SCN2BO60939 215 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 HOXD10P28358 340 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 GPC1P35052 558 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 CRYBA2P53672 197 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 AP1S2P56377 157 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 CDC42P60953 191 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 TLE2Q04725 743 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 CAMKK1Q8N5S9 505 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 TMEM175Q9BSA9 504 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 OSGEPL1Q9H4B0 414 aa12.95□□□□□ -0.34
VHL-201ENST00000256474 HTR3EA5X5Y0 456 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 EFCAB10A6NFE3 127 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 ABLIM3O94929 683 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 KRT8P05787 483 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 TIA1P31483 386 aaKnown RBP eCLIP12.94□□□□□ -0.341e-21■■■■■ 26.9
VHL-201ENST00000256474 HOXD12P35452 270 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 TGFBR2P37173 567 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 MAGEA2P43356 314 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 MANFP55145 182 aaKnown RBP12.94□□□□□ -0.34
VHL-201ENST00000256474 SELENOWP63302 87 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 PTGES3Q15185 160 aaKnown RBP12.94□□□□□ -0.34
VHL-201ENST00000256474 SF3B4Q15427 424 aaKnown RBP eCLIP12.94□□□□□ -0.346e-7■■■■□ 20.8
VHL-201ENST00000256474 ATAD3BQ5T9A4 648 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 CEACAM20Q6UY09 585 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 ZNF783Q6ZMS7 281 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 LYSMD2Q8IV50 215 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 PARP16Q8N5Y8 322 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 FIBINQ8TAL6 211 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 OVCA2Q8WZ82 227 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 C7orf34Q96L11 122 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 MGLLQ99685 303 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 TVP23BQ9NYZ1 205 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 CLEC2DQ9UHP7 191 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 TMA7Q9Y2S6 64 aaKnown RBP12.94□□□□□ -0.34
VHL-201ENST00000256474 BACE2Q9Y5Z0 518 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 FEZF1A0PJY2 475 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 ZW10O43264 779 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 LRRTM2O43300 516 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 LATO43561 262 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 CCNKO75909 580 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 CXCL14O95715 111 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 DMPKQ09013 629 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 TEAD2Q15562 447 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 LHX8Q68G74 356 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 DNAJC22Q8N4W6 341 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 OR2A12Q8NGT7 310 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 ZNF480Q8WV37 535 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 ASAH2Q9NR71 780 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 TMEM45AQ9NWC5 275 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 TMCC3Q9ULS5 477 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
VHL-201ENST00000256474 SNX4O95219 450 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 TGM1P22735 817 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 TCEA1P23193 301 aaKnown RBP12.93□□□□□ -0.34
VHL-201ENST00000256474 SOX6P35712 828 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 NFE2L1Q14494 772 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 ARMC4Q5T2S8 1044 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 ANXA8L1Q5VT79 327 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 HIST2H2AA3Q6FI13 130 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 PAQR6Q6TCH4 344 aa12.93□□□□□ -0.34
VHL-201ENST00000256474 SHFQ7M4L6 423 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms