RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 FMO1Q01740 532 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 PYURFQ96I23 114 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 PCDHGC4Q9Y5F7 938 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 PCDHA2Q9Y5H9 948 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 NEO1Q92859 1461 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 MIA3Q5JRA6 1907 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 TREHO43280 583 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 MSCO60682 206 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 KLRK1P26718 216 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 DAG1Q14118 895 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 SGCAQ16586 387 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 SLC35C1Q96A29 364 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ZDHHC12Q96GR4 267 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 TP63Q9H3D4 680 aaPredicted RBP14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ARMC1Q9NVT9 282 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ST14Q9Y5Y6 855 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 IGFBP1P08833 259 aaPredicted RBP14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 H2BFMP0C1H6 154 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 PIM1P11309 404 aaPredicted RBP14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 EPHA1P21709 976 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 CX3CR1P49238 355 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ZNF404Q494X3 552 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 GLT8D1Q68CQ7 371 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ENPP7Q6UWV6 458 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 CNTN3Q9P232 1028 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 CA5BQ9Y2D0 317 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 SGCEO43556 437 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 BDKRB2P30411 391 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 FAM122CQ6P4D5 195 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 MBOAT1Q6ZNC8 495 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 NIPA1Q7RTP0 329 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 OR6N2Q8NGY6 317 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 CSPG4P5Q96PW8 444 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 CFAP20Q9Y6A4 193 aaKnown RBP14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 CLTCQ00610 1675 aaKnown RBP14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 A2ML1A8K2U0 1454 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 GOSR2O14653 212 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 DIRAS1O95057 198 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ERCC1P07992 297 aaPredicted RBP14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ZNF84P51523 738 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 PPP4CP60510 307 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 SEMG2Q02383 582 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 OR4K3Q96R72 315 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 RIOX1Q9H6W3 641 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 ZBTB26Q9HCK0 441 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 TAS2R9Q9NYW1 312 aa14.15□□□□□ -0.14
SPTLC2-201ENST00000216484 DNASE1P24855 282 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 SWT1Q5T5J6 900 aaKnown RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 Q8N9G6 341 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 C7orf26Q96N11 449 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 VRK1Q99986 396 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 ZNF442Q9H7R0 627 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 FCF1Q9Y324 198 aaKnown RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 DICER1Q9UPY3 1922 aaKnown RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 IRF6O14896 467 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 ATG12O94817 140 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 RSU1Q15404 277 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 GTPBP8Q8N3Z3 284 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 CNTNAP3BQ96NU0 1288 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 TUBA1CQ9BQE3 449 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 ZNF358Q9NW07 568 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 TCAF1Q9Y4C2 921 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 ZIC2O95409 532 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 TFPTP0C1Z6 253 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 HERVK_113P63132 956 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 MALLQ13021 153 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 SLBPQ14493 270 aaKnown RBP eCLIP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 GPRC6AQ5T6X5 926 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 ERVK-6Q9BXR3 956 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 CERS4Q9HA82 394 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 MYO3AQ8NEV4 1616 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 K7EPI3 171 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 RGS9O75916 674 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 APOA2P02652 100 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 SLC2A1P11166 492 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 AQP2P41181 271 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 TAF1AQ15573 450 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 INAVAQ3KP66 663 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 STRADAQ7RTN6 431 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 LINC00471Q8N535 108 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 IQCF1Q8N6M8 205 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 HOXB13Q92826 284 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 TMBIM1Q969X1 311 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 NUS1Q96E22 293 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 SMCO4Q9NRQ5 59 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 PCDHGA7Q9Y5G6 932 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 FAM170BA6NMN3 283 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 C6P13671 934 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 NT5DC1Q5TFE4 455 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 POLMQ9NP87 494 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 SNX10Q9Y5X0 201 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 CCDC85CA6NKD9 419 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 PRPS1L1P21108 318 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 VIPR1P32241 457 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 FRKP42685 505 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 PPP1R8Q12972 351 aaKnown RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 TRAM1Q15629 374 aa14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 SPRYD4Q8WW59 207 aaPredicted RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 CNOT11Q9UKZ1 510 aaKnown RBP14.14□□□□□ -0.15
SPTLC2-201ENST00000216484 CKAP5Q14008 2032 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms