RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 PCDHB11Q9Y5F2 797 aa14.47□□□□□ -0.09
EFNB1-201ENST00000204961 TRIM64A6NGJ6 449 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 C5orf58C9J3I9 102 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 AP3D1O14617 1153 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF197O14709 1029 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 GREM1O60565 184 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 CH25HO95992 272 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 HPRP00739 348 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 C9P02748 559 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 GSTM1P09488 218 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 IMPA1P29218 277 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 CAV3P56539 151 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 B3GLCTQ6Y288 498 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 CCDC80Q76M96 950 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF675Q8TD23 568 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 ZNF480Q8WV37 535 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 ART5Q96L15 291 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 NUAK2Q9H093 628 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 TIGARQ9NQ88 270 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 NDUFAF4Q9P032 175 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 TRBC2A0A5B9 178 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 PRAMEF25A6NGN4 478 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 SNPHO15079 494 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 ABLIM3O94929 683 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 CSF2P04141 144 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 RPS3P23396 243 aaKnown RBP eCLIP14.46□□□□□ -0.09
EFNB1-201ENST00000204961 RFX4Q33E94 735 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 STEAP3Q658P3 488 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 OR5D16Q8NGK9 328 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 CSGALNACT1Q8TDX6 532 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 FOPNLQ96NB1 174 aa14.46□□□□□ -0.09
EFNB1-201ENST00000204961 ADRA2AP08913 450 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 CCDC159P0C7I6 412 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 JUNBP17275 347 aaPredicted RBP14.46□□□□□ -0.1
EFNB1-201ENST00000204961 POLR2EP19388 210 aaKnown RBP14.46□□□□□ -0.1
EFNB1-201ENST00000204961 CNR2P34972 360 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 NNMTP40261 264 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 VIPR2P41587 438 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 KCNJ10P78508 379 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 TOP3AQ13472 1001 aaPredicted RBP14.46□□□□□ -0.1
EFNB1-201ENST00000204961 TUBA3CQ13748 450 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 OXA1LQ15070 435 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 TPRG1LQ5T0D9 272 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 EIF3MQ7L2H7 374 aaKnown RBP14.46□□□□□ -0.1
EFNB1-201ENST00000204961 FAM124AQ86V42 546 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 CAMKK1Q8N5S9 505 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 OR6Q1Q8NGQ2 317 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 NECTIN4Q96NY8 510 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 GPATCH2Q9NW75 528 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 RUVBL1Q9Y265 456 aaKnown RBP14.46□□□□□ -0.1
EFNB1-201ENST00000204961 CARD8Q9Y2G2 431 aa14.46□□□□□ -0.1
EFNB1-201ENST00000204961 M0R082 166 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 SCN2BO60939 215 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 IGHA2P01877 340 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 C8GP07360 202 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 CTSLP07711 333 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 CD40LGP29965 261 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 DOC2BQ14184 412 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 ZNF750Q32MQ0 723 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 ZMAT1Q5H9K5 638 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 CLEC12AQ5QGZ9 265 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 B3GNT7Q8NFL0 401 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 RELTQ969Z4 430 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 CAPNS2Q96L46 248 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 SLC29A3Q9BZD2 475 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 ASAH2Q9NR71 780 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 CXXC1Q9P0U4 656 aaPredicted RBP14.45□□□□□ -0.1
EFNB1-201ENST00000204961 GPR52Q9Y2T5 361 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 BRWD1Q9NSI6 2320 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 SCAMP2O15127 329 aaKnown RBP14.45□□□□□ -0.1
EFNB1-201ENST00000204961 GCM2O75603 506 aaPredicted RBP14.45□□□□□ -0.1
EFNB1-201ENST00000204961 GADD45GO95257 159 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 IDSP22304 550 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 RFX3P48380 749 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 RAE1P78406 368 aaKnown RBP14.45□□□□□ -0.1
EFNB1-201ENST00000204961 SRSF11Q05519 484 aaKnown RBP14.45□□□□□ -0.1
EFNB1-201ENST00000204961 HIST2H2ACQ16777 129 aaPredicted RBP14.45□□□□□ -0.1
EFNB1-201ENST00000204961 LRIF1Q5T3J3 769 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 DESI1Q6ICB0 168 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 LRRC70Q7Z2Q7 622 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 KREMEN2Q8NCW0 462 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 TP53INP1Q96A56 240 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 ITPAQ9BY32 194 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 TVP23BQ9NYZ1 205 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 PCYT1BQ9Y5K3 369 aaPredicted RBP14.45□□□□□ -0.1
EFNB1-201ENST00000204961 LYVE1Q9Y5Y7 322 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 CHD9Q3L8U1 2897 aa14.45□□□□□ -0.1
EFNB1-201ENST00000204961 KCNE1BA0A087WTH5 132 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 H7BY64 318 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 SLC16A6O15403 523 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 ALDH1A1P00352 501 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 GASTP01350 101 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 RPLP2P05387 115 aaKnown RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 GPR1P46091 355 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 CDK6Q00534 326 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 PIN1Q13526 163 aaPredicted RBP14.44□□□□□ -0.1
EFNB1-201ENST00000204961 ZNF404Q494X3 552 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 CBLL1Q75N03 491 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 DGLUCYQ7Z3D6 616 aa14.44□□□□□ -0.1
EFNB1-201ENST00000204961 OR5AR1Q8NGP9 310 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms