RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Rab28Q99KL7 221 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Itgb3bpQ9CQ82 176 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Prss23Q9D6X6 382 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Bpifa3Q9D9J8 232 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 1700034I23RikQ9D9Q3 184 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Slc15a2Q9ES07 729 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Lat2Q9JHL0 203 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Upk3aQ9JKX8 287 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tmem115Q9WUH1 350 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mtm1Q9Z2C5 603 aa8.71□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm35911A0A1D5RLS7 214 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Igsf23B2RTN2 239 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm4787B2RUD9 748 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vsig10lD3YZF7 868 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Klhl3E0CZ16 587 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vmn2r90E9PXJ8 863 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Acbd4E9Q289 327 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zfp141G3UY09 685 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 4930544D05RikJ3QK56 214 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Aldh3b3J3QMK6 479 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Erdr1J3QMM0 206 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cyp2d34L7N463 504 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Per2O54943 1257 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 B2mP01887 119 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Nme1P15532 152 aaKnown RBP8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ifnar1P33896 590 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rab23P35288 237 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 ElnP54320 860 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rab4aP56371 218 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tas2r16P59529 299 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 PamP97467 979 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mrgprb2Q3KNA1 338 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Plekhf1Q3TB82 279 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Pgap1Q3UUQ7 922 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Asap3Q5U464 904 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Foxn1Q61575 648 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Sqstm1Q64337 442 aaKnown RBP8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Galk2Q68FH4 458 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mtch1Q791T5 389 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr479Q7TRV1 327 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Adamtsl4Q80T21 1036 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 CslQ80X68 466 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Pced1bQ8BGX1 433 aaKnown RBP8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Clrn3Q8BHH8 226 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 RadxQ8C779 850 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zbtb6Q8K088 423 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Foxn4Q8K3Q3 521 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Kctd11Q8K485 232 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Syngr3Q8R191 229 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gipc3Q8R5M0 297 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Erlec1Q8VEH8 483 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr77Q8VEY9 312 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr474Q8VFC9 310 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr348Q8VGK3 313 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 DcxrQ91X52 244 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 1700029F12RikQ9CRB4 147 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 GOLGA7BQ9D428 167 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Chmp2aQ9DB34 222 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Susd2Q9DBX3 820 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Kiaa0141Q9DCV6 510 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Akr1a1Q9JII6 325 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Lpar2Q9JL06 348 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Sema7aQ9QUR8 664 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 PollQ9QXE2 573 aaKnown RBP8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 GdaQ9R111 454 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Sema6cQ9WTM3 931 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gdf2Q9WV56 428 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr1438-ps1A0A140LHS9 319 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Krt24A1L317 512 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Skint1A7TZE6 364 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr319L7MTY4 306 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vmn2r44L7N2E1 861 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Il1bP10749 269 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Hnf1aP22361 628 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ccnd3P30282 292 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 LepP41160 167 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Muc1Q02496 630 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Palb2Q3U0P1 1104 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Trpc5osQ3UHV4 110 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fam228bQ497Q6 232 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Lhfpl5Q4KL25 219 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mef2aQ60929 498 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Nr2e1Q64104 385 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Stx3Q64704 289 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Snrnp40Q6PE01 358 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tlr11Q6R5P0 926 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Eri1Q7TMF2 345 aaKnown RBP8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 RragdQ7TT45 449 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm5622Q810Q0 167 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 PimregQ8BFY7 231 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Adipor2Q8BQS5 386 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Abi1Q8CBW3 481 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Nkiras1Q8CEC5 192 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr586Q8VH13 317 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Asb7Q91ZU0 318 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 GatbQ99JT1 557 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gimap4Q99JY3 219 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cttnbp2nlQ99LJ0 638 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 CutaQ9CQ89 177 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cnot11Q9CWN7 505 aa8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms