RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Bmt2Q8BXK4 403 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Npsr1Q8BZP8 371 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 BpifcQ8C186 509 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slc35e2Q8C811 405 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slco4a1Q8K078 723 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 MepceQ8K3A9 666 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sdr9c7Q8K3P0 313 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Vmn1r185Q8R299 319 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sp2Q9D2H6 612 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mrpl19Q9D338 292 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Med11Q9D8C6 117 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nup188Q6ZQH8 1759 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Trgv2A2J008 116 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ssxa1B1AUS7 101 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm6882J3KMT3 313 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ldb2O55203 373 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mrps6P58064 125 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cd300lgQ1ERP8 331 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tmem181aQ3U3W2 474 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm10662Q3UT86 313 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slc23a3Q60850 611 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ggt1Q60928 568 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nlgn2Q69ZK9 836 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gpr17Q6NS65 339 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mettl6Q8BVH9 282 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 HopxQ8R1H0 73 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zfp61Q923D1 555 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ranbp3Q9CT10 491 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ndufaf4Q9D1H6 173 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sec13Q9D1M0 322 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Fam174aQ9D3L0 190 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zfp84Q9D654 559 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Fundc2Q9D6K8 151 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Kiaa0141Q9DCV6 510 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Msgn1Q9JK54 188 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Eif4hQ9WUK2 248 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr1164A2AVT5 326 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 9330159F19RikD3Z623 648 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm20828J3KMI7 228 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 JunP05627 334 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Actr1aP61164 376 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Il18P70380 192 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Atp5a1Q03265 553 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Wdr75Q3U821 830 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cdk15Q3V3A1 433 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zscan26Q5RJ54 466 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Spin1Q61142 262 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Zfand1Q8BFR6 268 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Actr1bQ8R5C5 376 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Rhbdl1Q8VC82 373 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Rnf130Q8VEM1 419 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mrps18aQ99N85 196 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 ScelQ9EQG3 652 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Adam25Q9R159 760 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Rpl7a-ps3A0A140T8L1 270 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nhsl2B1AXH1 854 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 RngttO55236 597 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Adra2bP30545 450 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 SgcgP82348 291 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Trappc13Q3TIR1 417 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 IspdQ5RJG7 447 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Krtcap2Q5RL79 136 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tmem72Q8C3K5 275 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 OptcQ920A0 328 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Q9CZV2 255 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Aldh7a1Q9DBF1 539 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Znf207Q9JMD0 495 aaKnown RBP9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nr4a3Q9QZB6 627 aa9.95□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm3636E9Q5P1 227 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gm340F6RGI3 1242 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 St3gal5O88829 414 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Csf3rP40223 837 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Igfbp2P47877 305 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 PrkacbP68181 351 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Kcnj13P86046 360 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Fut7Q11131 389 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ripk1Q60855 656 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Clcn4Q61418 747 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Nsg1Q62092 185 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Kir3dl2Q673W2 388 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Las2Q8CB14 526 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Q8K207 121 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Gpr37l1Q99JG2 481 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Mat2bQ99LB6 334 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 EcdQ9CS74 641 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Ndufs4Q9CXZ1 175 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Alg14Q9D081 217 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Creb3l4Q9D2A5 370 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr675A0A1B0GSE1 317 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 4932443I19RikA0A286YE38 169 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Sac3d1A6H687 427 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Olfr172E9Q8F6 309 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 G430095P16RikE9Q913 147 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Tex16F6WNY1 1150 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Slc22a1O08966 556 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Acvr2aP27038 513 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pdx1P52946 284 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 UradQ283N4 178 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Cnpy1Q4VAB4 94 aa9.94□□□□□ -0.82
Ccdc40-201ENSMUST00000035935 Pnliprp1Q5BKQ4 473 aa9.94□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 34.9 ms