RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 TLR4O00206 839 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 VILLO15195 856 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 CLDN7O95471 211 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 APBB3O95704 486 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 HNRNPA1P09651 372 aaKnown RBP eCLIP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 PRKCIP41743 596 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 GRIA2P42262 883 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 CCNHP51946 323 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 SMSP52788 366 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 ZFP69Q49AA0 526 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 KDELC1Q6UW63 502 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 GEMIN6Q8WXD5 167 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 TSACCQ96A04 125 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 INPP4AQ96PE3 977 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 EHD1Q9H4M9 534 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 TUBA8Q9NY65 449 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 COMMD3Q9UBI1 195 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 COMMD3-BMI1R4GMX3 469 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 FABP12A6NFH5 140 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 TGM5O43548 720 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 ORC5O43913 435 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 AIREO43918 545 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 ENTPD6O75354 484 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 FAM155BO75949 473 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 PLATP00750 562 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 PRPS1L1P21108 318 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 RHEBQ15382 184 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 RBM44Q6ZP01 1051 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 TXNDC5Q8NBS9 432 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 NFKBIDQ8NI38 313 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 PCDHB18PQ96TA0 734 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 TMED9Q9BVK6 235 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 TRIM36Q9NQ86 728 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 FLRT1Q9NZU1 646 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 VSTM2BA6NLU5 285 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 H1F0P07305 194 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 CDH1P12830 882 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 GBE1Q04446 702 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 HACD2Q6Y1H2 254 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 PDSS2Q86YH6 399 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 C1orf52Q8N6N3 182 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 OR6N2Q8NGY6 317 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 KCNN1Q92952 543 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 PELOQ9BRX2 385 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 CPEB1Q9BZB8 566 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 MS4A12Q9NXJ0 267 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 AP1M2Q9Y6Q5 423 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 A0A0U1RQJ8 604 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 TTC24A2A3L6 582 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 SLC7A4O43246 635 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 DLX3O60479 287 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 RPLP0P05388 317 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 EIF4EP06730 217 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 SFTPBP07988 381 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 S1PR1P21453 382 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 GABRA3P34903 492 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 NPTX1Q15818 432 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 C3orf38Q5JPI3 329 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 TPRG1LQ5T0D9 272 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 ZBTB46Q86UZ6 589 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 PLD5Q8N7P1 536 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 OR10G2Q8NGC3 310 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 OR13C3Q8NGS6 347 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 BRI3BPQ8WY22 251 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 RAB7BQ96AH8 199 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 MOAP1Q96BY2 351 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 CDK15Q96Q40 435 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 RAB26Q9ULW5 256 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 ATRNL1Q5VV63 1379 aa6.22□□□□□ -1.41
SRGAP1-207ENST00000631006 C9JVG2 144 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 TSPAN4O14817 238 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 TSPAN6O43657 245 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 ZNF12P17014 697 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 ATF4P18848 351 aaPredicted RBP6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 AZGP1P25311 298 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 CTHP32929 405 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 MSX2P35548 267 aaPredicted RBP6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 RABIFP47224 123 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 HERC3Q15034 1050 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 ZNF542PQ5EBM4 170 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 PPM1JQ5JR12 505 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 LINC00471Q8N535 108 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 OR8H1Q8NGG4 311 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 HPS1Q92902 700 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 DNAJA3Q96EY1 480 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 TFB2MQ9H5Q4 396 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 LMAN1LQ9HAT1 526 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 LRRC4CQ9HCJ2 640 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 MTMR10Q9NXD2 777 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 NOP16Q9Y3C1 178 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 DEPDC5O75140 1603 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 DLG5Q8TDM6 1919 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 ERCC6L2Q5T890 1561 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 A0A087WUU8 490 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 ZNF860A6NHJ4 632 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 CCNE2O96020 404 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 IFNA5P01569 189 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 CD79AP11912 226 aa6.21□□□□□ -1.41
SRGAP1-207ENST00000631006 DSC1Q08554 894 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms