RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	CYP17A1	P05093	508 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	CSF3	P09919	207 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	GK	P32189	559 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	PTGS2	P35354	604 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	RPS5	P46782	204 aa	Known RBP	13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	ITGA1	P56199	1179 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	ARF5	P84085	180 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	CHRNA6	Q15825	494 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	DUOXA1	Q1HG43	343 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	TIMM50	Q3ZCQ8	353 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	PLET1	Q6UQ28	207 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	FAM124A	Q86V42	546 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	SLC34A3	Q8N130	599 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	PMEPA1	Q969W9	287 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	ASIC4	Q96FT7	647 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	MYO19	Q96H55	970 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	ZSCAN5A	Q9BUG6	496 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	GPR62	Q9BZJ7	368 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	IL26	Q9NPH9	171 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	ASAH2	Q9NR71	780 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	UCKL1	Q9NWZ5	548 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	TRAPPC4	Q9Y296	219 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	MAN2B2	Q9Y2E5	1009 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	ALG5	Q9Y673	324 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	GLYATL1P3	A0A0U1RQE8	302 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	LEUTX	A8MZ59	168 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045		B8ZZF3	427 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	TSPAN9	O75954	239 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	PTPN6	P29350	595 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	GZMK	P49863	264 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	SPIB	Q01892	262 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	SF1	Q15637	639 aa	Known RBP	13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	UBE2R2	Q712K3	238 aa	Predicted RBP	13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	SERPINA11	Q86U17	422 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	ATG10	Q9H0Y0	220 aa		13.84	□□□□□ -0.19
SYNRG-231	ENST00000622045	PLK4	O00444	970 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	ACPP	P15309	386 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	GPC1	P35052	558 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	RORC	P51449	518 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	CYP4F8	P98187	520 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	NOXRED1	Q6NXP6	359 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	ERICH5	Q6P6B1	374 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	NACC2	Q96BF6	587 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	CMAHP	Q9Y471	501 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	OR6C75	A6NL08	312 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045		K7ERQ8	282 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	KLKB1	P03952	638 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	ATF4	P18848	351 aa	Predicted RBP	13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	RPS3	P23396	243 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	PPIG	Q13427	754 aa	Known RBP eCLIP	13.83	□□□□□ -0.2	2e-6	■□□□□ 9.5
SYNRG-231	ENST00000622045	ESCO2	Q56NI9	601 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	HECTD3	Q5T447	861 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	RNF130	Q86XS8	419 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	KRT73	Q86Y46	540 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	TMC8	Q8IU68	726 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	LGI4	Q8N135	537 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	NLK	Q9UBE8	527 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	SLC22A14	Q9Y267	594 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	PCDHGB3	Q9Y5G1	929 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	SLC38A8	A6NNN8	435 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045		H3BNC9	293 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	HNRNPA0	Q13151	305 aa	Known RBP	13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	CLLU1OS	Q5K130	101 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	CCSAP	Q6IQ19	270 aa	Predicted RBP	13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZNF367	Q7RTV3	350 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	PTOV1	Q86YD1	416 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	TRIM45	Q9H8W5	580 aa	Predicted RBP	13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	TPT1P8	Q9HAU6	139 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045	MCUB	Q9NWR8	336 aa		13.83	□□□□□ -0.2
SYNRG-231	ENST00000622045		A0A075B6Q4	140 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045		A0A1W2PQL4	384 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045		I3L521	148 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	SYN3	O14994	580 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	ASGR1	P07306	291 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	PRPS1L1	P21108	318 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	CAV3	P56539	151 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	PSPH	P78330	225 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	BCL2L1	Q07817	233 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	ZNF267	Q14586	743 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	GPR19	Q15760	415 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	C5orf22	Q49AR2	442 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	SAXO2	Q658L1	398 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	KLHL17	Q6TDP4	642 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	PTCHD4	Q6ZW05	846 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	OR9Q1	Q8NGQ5	310 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	PLCXD1	Q9NUJ7	323 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	ASIC5	Q9NY37	505 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	POLH	Q9Y253	713 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	TBL1X	O60907	577 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	MYC	P01106	439 aa	Predicted RBP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	FEN1	P39748	380 aa	Known RBP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	MAN2A2	P49641	1150 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	BOP1	Q14137	746 aa	Known RBP	13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	EXOC3L2	Q2M3D2	409 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	GPRC6A	Q5T6X5	926 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	SLC24A5	Q71RS6	500 aa		13.82	□□□□□ -0.2
SYNRG-231	ENST00000622045	CMTM7	Q96FZ5	175 aa		13.82	□□□□□ -0.2

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