RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ZNF639Q9UID6 485 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 FBXL2Q9UKC9 423 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 KCTD3Q9Y597 815 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 C1orf196B1AJZ1 125 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 J3KR12 359 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 OIP5O43482 229 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 FARS2O95363 451 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 EGFRP00533 1210 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 ACSM4P0C7M7 580 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 KDELR2P33947 212 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 MFSD14CQ5VZR4 134 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CPZQ66K79 652 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 ISCA2Q86U28 154 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 MIB1Q86YT6 1006 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CLRN3Q8NCR9 226 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 TMEM185AQ8NFB2 350 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 DNERQ8NFT8 737 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 OR4A15Q8NGL6 344 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 STOX2Q9P2F5 926 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 ASF1AQ9Y294 204 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 PCDHGA6Q9Y5G7 932 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 PLIN4Q96Q06 1357 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CICQ96RK0 1608 aaPredicted RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 DCLK1O15075 740 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CLTBP09497 229 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CAP2P40123 477 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 CDKN2CP42773 168 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 GPR15P49685 360 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 ZNF234Q14588 700 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 MFSD10Q14728 455 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 TOR1AIP1Q5JTV8 583 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 RAB11FIP2Q7L804 512 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 PDZD3Q86UT5 571 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 HS6ST3Q8IZP7 471 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 SIDT2Q8NBJ9 832 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 MARC2Q969Z3 335 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 TBX5Q99593 518 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 DCAF13Q9NV06 445 aaKnown RBP13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 HOXC10Q9NYD6 342 aa13.09□□□□□ -0.31
PPP4R3B-205ENST00000616288 PHRF1Q9P1Y6 1649 aaKnown RBP13.08□□□□□ -0.31
PPP4R3B-205ENST00000616288 NUP214P35658 2090 aaPredicted RBP13.08□□□□□ -0.31
PPP4R3B-205ENST00000616288 ARID1AO14497 2285 aa13.08□□□□□ -0.31
PPP4R3B-205ENST00000616288 OR2AT4A6NND4 320 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 H3BQ06 376 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 UBFD1O14562 309 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 B4GALT4O60513 344 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 CD2P06729 351 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 GIFP27352 417 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 PITX1P78337 314 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 DSC2Q02487 901 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 ASAH1Q13510 395 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 FAM171BQ6P995 826 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 TMEM65Q6PI78 240 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 TAS1R3Q7RTX0 852 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 PTRH1Q86Y79 214 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 DNAJC22Q8N4W6 341 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR4F6Q8NGB9 312 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 SFXN2Q96NB2 322 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 TSSK6Q9BXA6 273 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 SEMA3GQ9NS98 782 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 PADI2Q9Y2J8 665 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 CITO14578 2027 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 KANTRA0A1W2PQU2 76 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 GLUD1P00367 558 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 HTR6P50406 440 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 CDKN2DP55273 166 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 LRRC37A5PQ49AS3 106 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 SPOUT1Q5T280 376 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 TSPAN33Q86UF1 283 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR52B6Q8NGF0 335 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF578Q96N58 590 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 SLC38A2Q96QD8 506 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 WNK3Q9BYP7 1800 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 ARHGAP39Q9C0H5 1083 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR10A4Q9H209 315 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 TFB2MQ9H5Q4 396 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 PIN4Q9Y237 131 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 MAP4K5Q9Y4K4 846 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 A0A1B0GVI7 797 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 WRBO00258 174 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 E2F3O00716 465 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 GPR182O15218 404 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 IFNW1P05000 195 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 CSF3P09919 207 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 ACPPP15309 386 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 RHCEP18577 417 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 PCMT1P22061 227 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 RAB2AP61019 212 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 PPIGQ13427 754 aaKnown RBP eCLIP13.08□□□□□ -0.325e-7■□□□□ 11
PPP4R3B-205ENST00000616288 VARS2Q5ST30 1063 aaKnown RBP13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 TMEM179BQ7Z7N9 219 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 CLEC4DQ8WXI8 215 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 LINC00052Q96N35 136 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF583Q96ND8 569 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 HTATIP2Q9BUP3 242 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 MTMR10Q9NXD2 777 aa13.08□□□□□ -0.32
PPP4R3B-205ENST00000616288 CD8B2A6NJW9 211 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms