RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PWWP2AQ96N64 755 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 PTDSS2Q9BVG9 487 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 GPR61Q9BZJ8 451 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 SIX4Q9UIU6 781 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 TCRBV3S1A0A5B6 114 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 F9P00740 461 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 ADH1AP07327 375 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 MLLT1Q03111 559 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 PPP3CAQ08209 521 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 EML3Q32P44 896 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 RFTN2Q52LD8 501 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CYBRD1Q53TN4 286 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CPTPQ5TA50 214 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 NKAPQ8N5F7 415 aaKnown RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 OR4K3Q96R72 315 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 METTL9Q9H1A3 318 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 POLR2J3Q9H1A7 115 aaKnown RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 AAASQ9NRG9 546 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 LYPLA2O95372 231 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 LTFP02788 710 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 GKN3PP0CG01 181 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 NDUFA9Q16795 377 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 PCK2Q16822 640 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 LINGO4Q6UY18 593 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 WASH2PQ6VEQ5 465 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 GPR149Q86SP6 731 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 MYRFLQ96LU7 910 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 KCNQ5Q9NR82 932 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 DIMT1Q9UNQ2 313 aaKnown RBP4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CBX4O00257 560 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 DGAT1O75907 488 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 NCK1P16333 377 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CHRM3P20309 590 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CAP2P40123 477 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 TROAPQ12815 778 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 DOC2AQ14183 400 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 LETMD1Q6P1Q0 360 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 COX15Q7KZN9 410 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 OR8J3Q8NGG0 315 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 TRIM36Q9NQ86 728 aa4.8□□□□□ -1.64
VPS13D-213ENST00000613099 CNTNAP2Q9UHC6 1331 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 SIPA1L1O43166 1804 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 A0A087X0M5 115 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 PRSS51A0A1B0GVH4 220 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 A0A1B0GX30 115 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 F5H5P2 479 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 GLAP06280 429 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 UROSP10746 265 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 ITGAMP11215 1152 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 BCKDHAP12694 445 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 NHLH2Q02577 135 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 ZNHIT3Q15649 155 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 CEP68Q76N32 757 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 THAP7Q9BT49 309 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 ANKRD63C9JTQ0 380 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 F8VP50 259 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 IL1AP01583 271 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 COL6A1P12109 1028 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TGM1P22735 817 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF143P52747 638 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 DSC1Q08554 894 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 KCNAB2Q13303 367 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 CEACAM7Q14002 265 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 FAM69AQ5T7M9 428 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 SPRED1Q7Z699 444 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 JAZF1Q86VZ6 243 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 LINC00471Q8N535 108 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 PANX1Q96RD7 426 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 COA1Q9GZY4 146 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TUBG2Q9NRH3 451 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TXNL4BQ9NX01 149 aaKnown RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 VWA7Q9Y334 891 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 NDUFS8O00217 210 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 RAET1GQ6H3X3 334 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 SCIMPQ6UWF3 145 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 NLRP8Q86W28 1048 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 IL17RDQ8NFM7 739 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TAS1R2Q8TE23 839 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 SFXN2Q96NB2 322 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 FCRL4Q96PJ5 515 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 OR52B2Q96RD2 323 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 PARP14Q460N5 1801 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 NPIPA2E9PIF3 369 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 ALDH1A2O94788 518 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TSPAN12O95859 305 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 IFNA21P01568 189 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 EPOP01588 193 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 DHRS4L1P0CG22 281 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 GSTM3P21266 225 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TNFSF8P32971 234 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 NOS2P35228 1153 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 KCNJ10P78508 379 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TRIM61Q5EBN2 209 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 GMCL1P1Q8NEA9 526 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 OR51V1Q9H2C8 321 aa4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TEX10Q9NXF1 929 aaPredicted RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 GAR1Q9NY12 217 aaKnown RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TDRD15B5MCY1 1934 aaKnown RBP4.79□□□□□ -1.64
VPS13D-213ENST00000613099 TPRP12270 2363 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms