RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 SNX15Q9NRS6 342 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 PTGFRNQ9P2B2 879 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 COPG2Q9UBF2 871 aa18.38■□□□□ 0.53
SREBF1-220ENST00000581707 ANKDD1BA6NHY2 528 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 UBXN8O00124 270 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 PRAMEF4O60810 478 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 UQCRHP07919 91 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 ITGAMP11215 1152 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 JAK1P23458 1154 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 ECHS1P30084 290 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 GLRBP48167 497 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 IRF9Q00978 393 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 DOC2AQ14183 400 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 PRAMEF9Q5VWM5 478 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 LRRC70Q7Z2Q7 622 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 CENPLQ8N0S6 344 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-220ENST00000581707 SIRT6Q8N6T7 355 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 CEP112Q8N8E3 955 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 CCT6BQ92526 530 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 C19orf60Q96EN9 201 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 WDR34Q96EX3 536 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 PTCD3Q96EY7 689 aaKnown RBP18.37■□□□□ 0.53
SREBF1-220ENST00000581707 SEC16BQ96JE7 1060 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 AICDAQ9GZX7 198 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 PCDHGA10Q9Y5H3 936 aa18.37■□□□□ 0.53
SREBF1-220ENST00000581707 A0A096LPK6 155 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 CCDC189A1A4V9 331 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 LRIT2A6NDA9 550 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 SYCE1LA8MT33 242 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 MAGEB17A8MXT2 336 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 C4orf51C9J302 202 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 B4GALT2O60909 372 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 CLEC3AO75596 197 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 RNH1P13489 461 aaKnown RBP18.36■□□□□ 0.53
SREBF1-220ENST00000581707 GNLYP22749 145 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 TYK2P29597 1187 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 SOX11P35716 441 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 BTN3A2P78410 334 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 IRF8Q02556 426 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 PLAG1Q6DJT9 500 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 AMER2Q8N7J2 671 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 RHEBL1Q8TAI7 183 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 SLC44A1Q8WWI5 657 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 GAL3ST3Q96A11 431 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 FAR2Q96K12 515 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 CNDP1Q96KN2 507 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 EFCAB11Q9BUY7 163 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 ZNF490Q9ULM2 529 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-220ENST00000581707 ASB1Q9Y576 335 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 COL12A1Q99715 3063 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 HECTD1Q9ULT8 2610 aa18.36■□□□□ 0.53
SREBF1-220ENST00000581707 ESPL1Q14674 2120 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 KLHL2O95198 593 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 ALDOAP04075 364 aaKnown RBP18.35■□□□□ 0.53
SREBF1-220ENST00000581707 INHBAP08476 426 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 EPORP19235 508 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 HNRNPH1P31943 449 aaKnown RBP18.35■□□□□ 0.53
SREBF1-220ENST00000581707 HPDP32754 393 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-220ENST00000581707 UQCRFS1P47985 274 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 SERPINB8P50452 374 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 ACTN3Q08043 901 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-220ENST00000581707 CHIT1Q13231 466 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 LAPTM5Q13571 262 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 ZNF169Q14929 603 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-220ENST00000581707 ACAP2Q15057 778 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 TLR1Q15399 786 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 TBCCQ15814 346 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 HIST2H2ACQ16777 129 aaPredicted RBP18.35■□□□□ 0.53
SREBF1-220ENST00000581707 BTBD16Q32M84 506 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 SFT2D3Q587I9 215 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 PAGE2BQ5JRK9 111 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 HIST2H2AA3Q6FI13 130 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 CATSPER1Q8NEC5 780 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 UBTD2Q8WUN7 234 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 TSLPQ969D9 159 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 MS4A6EQ96DS6 147 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 SLC29A3Q9BZD2 475 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 RHBGQ9H310 441 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 ASF1BQ9NVP2 202 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 PLA2G3Q9NZ20 509 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 OPTCQ9UBM4 332 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 COPG1Q9Y678 874 aaKnown RBP18.35■□□□□ 0.53
SREBF1-220ENST00000581707 IKBKGQ9Y6K9 419 aa18.35■□□□□ 0.53
SREBF1-220ENST00000581707 PTPN13Q12923 2485 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 DYTNA2CJ06 578 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 TCP11X1B4DZS4 312 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 K7EPI3 171 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 PSMD12O00232 456 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-220ENST00000581707 ERI3O43414 337 aaKnown RBP18.34■□□□□ 0.53
SREBF1-220ENST00000581707 PRMT3O60678 531 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 MTHFD2P13995 350 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 CD22P20273 847 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 CASP2P42575 452 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 OR4D2P58180 307 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 ARG2P78540 354 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 UBAP2LQ14157 1087 aaKnown RBP18.34■□□□□ 0.53
SREBF1-220ENST00000581707 EXT1Q16394 746 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 B3GNTL1Q67FW5 361 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-220ENST00000581707 KLC3Q6P597 504 aa18.34■□□□□ 0.53
SREBF1-220ENST00000581707 VN1R5Q7Z5H4 357 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms