RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 SCN3AQ9NY46 2000 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 A0A0G2JN53 185 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 SGK494L7N484 410 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 ERI3O43414 337 aaKnown RBP17.06■□□□□ 0.32
COMMD4-222ENST00000568034 CNOT3O75175 753 aaKnown RBP17.06■□□□□ 0.32
COMMD4-222ENST00000568034 DNAJB6O75190 326 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 SNNO75324 88 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-222ENST00000568034 KRT6AP02538 564 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 KRT6BP04259 564 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 KLK3P07288 261 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-222ENST00000568034 UROSP10746 265 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 F8A1P23610 371 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 KRT6CP48668 564 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 DCDP81605 110 aaKnown RBP17.06■□□□□ 0.32
COMMD4-222ENST00000568034 SRSF6Q13247 344 aaKnown RBP17.06■□□□□ 0.32
COMMD4-222ENST00000568034 SLC9A5Q14940 896 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 ABRAXAS2Q15018 415 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 HERC3Q15034 1050 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 UGT3A2Q3SY77 523 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 DEFB134Q4QY38 66 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 TMEM35AQ53FP2 167 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF793Q6ZN11 406 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 ABHD13Q7L211 337 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF248Q8NDW4 579 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 RAB3IL1Q8TBN0 382 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 NAF1Q96HR8 494 aaKnown RBP17.06■□□□□ 0.32
COMMD4-222ENST00000568034 EML4Q9HC35 981 aaKnown RBP17.06■□□□□ 0.32
COMMD4-222ENST00000568034 ANKHQ9HCJ1 492 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 PRDM7Q9NQW5 492 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 HAO1Q9UJM8 370 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 CROTQ9UKG9 612 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 NAALAD2Q9Y3Q0 740 aa17.06■□□□□ 0.32
COMMD4-222ENST00000568034 TPRP12270 2363 aaKnown RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 SERTM1A2A2V5 107 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 URADA6NGE7 173 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF860A6NHJ4 632 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 H0YIG0 161 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 SAP18O00422 153 aaKnown RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 RTCAO00442 366 aaKnown RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 PLPP1O14494 284 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 RDH16O75452 317 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 EIF2S3P41091 472 aaKnown RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 SLC1A6P48664 564 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 PLA2G16P53816 162 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 PHEXP78562 749 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF33BQ06732 778 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 STX3Q13277 289 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 CUL3Q13618 768 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 DSG2Q14126 1118 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 SYT16Q17RD7 645 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 HSP90B2PQ58FF3 399 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 SH2D4BQ5SQS7 431 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ARHGAP40Q5TG30 622 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 MRPL14Q6P1L8 145 aaKnown RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 SCIMPQ6UWF3 145 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 RNF165Q6ZSG1 346 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 PROSER1Q86XN7 944 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 TMEM151BQ8IW70 566 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF781Q8N8C0 355 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 OR5T3Q8NGG3 340 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 KCNE4Q8WWG9 221 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ZCCHC14Q8WYQ9 949 aaKnown RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 MMABQ96EY8 250 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 C17orf62Q9BQA9 187 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 SORBS1Q9BX66 1292 aaKnown RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ACPTQ9BZG2 426 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 TUBB1Q9H4B7 451 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 BRF2Q9HAW0 419 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ZNF304Q9HCX3 659 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 INTS9Q9NV88 658 aaKnown RBP17.05■□□□□ 0.32
COMMD4-222ENST00000568034 CDC14AQ9UNH5 594 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 SSUH2Q9Y2M2 353 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 TRAF6Q9Y4K3 522 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 CCL27Q9Y4X3 112 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 DNAJC15Q9Y5T4 150 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 PTGDR2Q9Y5Y4 395 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ZFHX4Q86UP3 3567 aa17.05■□□□□ 0.32
COMMD4-222ENST00000568034 ACACBO00763 2458 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 IGLV3-12A0A075B6K2 115 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 KLF11O14901 512 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 ULK1O75385 1050 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 SEMA3DO95025 777 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 SCELO95171 688 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 HSPA4LO95757 839 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 CCNYL3P0C7X3 344 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 NEFHP12036 1026 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 AGXTP21549 392 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 PTX3P26022 381 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-222ENST00000568034 AVPR1BP47901 424 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 FOXL2P58012 376 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 BTN3A2P78410 334 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 MAT1AQ00266 395 aaKnown RBP17.04■□□□□ 0.32
COMMD4-222ENST00000568034 OCRLQ01968 901 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 TBL3Q12788 808 aaKnown RBP17.04■□□□□ 0.32
COMMD4-222ENST00000568034 CSTF3Q12996 717 aaKnown RBP17.04■□□□□ 0.32
COMMD4-222ENST00000568034 DNASE1L3Q13609 305 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 NCF4Q15080 339 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 TRIM40Q6P9F5 258 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 CHSY3Q70JA7 882 aa17.04■□□□□ 0.32
COMMD4-222ENST00000568034 VASH2Q86V25 355 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms