RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 NYXQ9GZU5 481 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 GPN1Q9HCN4 374 aaPredicted RBP3.88□□□□□ -1.79
PRPF39-210ENST00000556718 TBC1D13Q9NVG8 400 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 MIS18AQ9NYP9 233 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 TMED7Q9Y3B3 224 aa3.88□□□□□ -1.79
PRPF39-210ENST00000556718 WDR81Q562E7 1941 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 IGHV4-61A0A0C4DH41 118 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 TRBV5-5A0A0J9YX44 114 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 ANTXRLA6NF34 631 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 CFAP73A6NFT4 308 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 H3BMM5 538 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 TLR4O00206 839 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 BMPR1BO00238 502 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 SLC28A1O00337 649 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 KLF11O14901 512 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 CHUKO15111 745 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 FGF17O60258 216 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 IGHV4-59P01825 116 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 CRYAAP02489 173 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 SFTPBP07988 381 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 F7P08709 466 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 CD59P13987 128 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 CCNA2P20248 432 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 SLC1A3P43003 542 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 HNRNPFP52597 415 aaKnown RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 LBX1P52954 281 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 POLR2FP61218 127 aaKnown RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 ITGA9Q13797 1035 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 ZC2HC1CQ53FD0 456 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 XKR3Q5GH77 459 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 CEP85LQ5SZL2 805 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 TEX35Q5T0J7 233 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 PSRC1Q6PGN9 363 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 C15orf52Q6ZUT6 534 aaKnown RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 C9orf139Q6ZV77 190 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 ZNF771Q7L3S4 317 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 COX8CQ7Z4L0 72 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 CPEB2Q7Z5Q1 589 aaKnown RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 FBXW8Q8N3Y1 598 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 MARVELD2Q8N4S9 558 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 KBTBD3Q8NAB2 608 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 GPRC5AQ8NFJ5 357 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 KBTBD8Q8NFY9 601 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 OLIG1Q8TAK6 271 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 CCDC110Q8TBZ0 833 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 HAS2Q92819 552 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 TMEM186Q96B77 213 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 SLCO4A1Q96BD0 722 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 EPYCQ99645 322 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 LPAR4Q99677 370 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 MTIF3Q9H2K0 278 aaKnown RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 ZDHHC6Q9H6R6 413 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 MARCH7Q9H992 704 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 RNF186Q9NXI6 227 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 PRDM4Q9UKN5 801 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 ELF5Q9UKW6 265 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 NAP1L2Q9ULW6 460 aaPredicted RBP3.87□□□□□ -1.79
PRPF39-210ENST00000556718 EXOC7Q9UPT5 735 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 SH3GLB1Q9Y371 365 aa3.87□□□□□ -1.79
PRPF39-210ENST00000556718 MACROD2A1Z1Q3 448 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 A8MVM7 634 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 FPGTO14772 594 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 KIF5CO60282 957 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 CIDEAO60543 219 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 TRIM16O95361 564 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 TSHBP01222 138 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 PRSS1P07477 247 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 GHRP10912 638 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 PAX1P15863 534 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 ITGA3P26006 1051 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SRD5A2P31213 254 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 DUTP33316 252 aaKnown RBP3.86□□□□□ -1.79
PRPF39-210ENST00000556718 GPC3P51654 580 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SSTP61278 116 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 HTD2P86397 168 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 ILF3Q12906 894 aaKnown RBP eCLIP3.86□□□□□ -1.79
PRPF39-210ENST00000556718 CDH18Q13634 790 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 KRT31Q15323 416 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 CARTPTQ16568 116 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 XKR6Q5GH73 641 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SLC25A53Q5H9E4 307 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 LCE3CQ5T5A8 94 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 ARHGEF16Q5VV41 709 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SLC27A4Q6P1M0 643 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 DHRS11Q6UWP2 260 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 PIGZQ86VD9 579 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 NLRP14Q86W24 1093 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 TDHQ8IZJ6 230 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 KIRREL3Q8IZU9 778 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 GPC2Q8N158 579 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 CCDC185Q8N715 623 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 STPG4Q8N801 248 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SIDT2Q8NBJ9 832 aaKnown RBP3.86□□□□□ -1.79
PRPF39-210ENST00000556718 TMEM185AQ8NFB2 350 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 OR4A16Q8NH70 328 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SPATA18Q8TC71 538 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 U2AF1L4Q8WU68 220 aaKnown RBP3.86□□□□□ -1.79
PRPF39-210ENST00000556718 SHARPINQ9H0F6 387 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 TRPV6Q9H1D0 765 aa3.86□□□□□ -1.79
PRPF39-210ENST00000556718 CARD9Q9H257 536 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms