RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SPARCP09486 303 aa14.96□□□□□ -0.02
CHD4-210ENST00000544040 ALG10BQ5I7T1 473 aa14.96□□□□□ -0.02
CHD4-210ENST00000544040 DRICH1Q6PGQ1 229 aaPredicted RBP14.96□□□□□ -0.02
CHD4-210ENST00000544040 FIP1L1Q6UN15 594 aaKnown RBP14.96□□□□□ -0.02
CHD4-210ENST00000544040 C11orf98E9PRG8 122 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 M0R2N6 131 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 SYN3O14994 580 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 AHSGP02765 367 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 DPYSL2Q16555 572 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 ZNF792Q3KQV3 632 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 CHRFAM7AQ494W8 412 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 ATAD3CQ5T2N8 411 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 OR4E2Q8NGC2 313 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 OSBPL2Q9H1P3 480 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 A0A1W2PRU2 124 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 FLRT2O43155 660 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 CFHP08603 1231 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 UNGP13051 313 aaPredicted RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 S100PP25815 95 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 RBMXP38159 391 aaKnown RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 NR4A2P43354 598 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 CYP1B1Q16678 543 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 TXNRD3NBQ6F5E7 133 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 ZSCAN4Q8NAM6 433 aaPredicted RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 SLC22A17Q8WUG5 538 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 HMGB4Q8WW32 186 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 NSMAFQ92636 917 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 RAB8BQ92930 207 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 AURKBQ96GD4 344 aaPredicted RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 AGAP5A6NIR3 686 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 B8ZZF3 427 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 CASRP41180 1078 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 MAGEA3P43357 314 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 CLRN1P58418 232 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 COL9A2Q14055 689 aaPredicted RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 LAS2Q8IYD9 372 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 METTL27Q8N6F8 245 aaPredicted RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 CREB3L1Q96BA8 519 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 CDKN2AIPNLQ96HQ2 116 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 METTL7AQ9H8H3 244 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 KCTD3Q9Y597 815 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 SLC19A2O60779 497 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 ALPPL2P10696 532 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 UBXN2BQ14CS0 331 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 PHF19Q5T6S3 580 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 GTF2IRD2BQ6EKJ0 949 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 GPAT4Q86UL3 456 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 GTF2IRD2Q86UP8 949 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 SSX3Q99909 188 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 NIFKQ9BYG3 293 aaKnown RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 ZFR2Q9UPR6 939 aaKnown RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 TMEM98Q9Y2Y6 226 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 ACVRL1P37023 503 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 UBE2UQ5VVX9 321 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 SUSD1Q6UWL2 747 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 TMCO2Q7Z6W1 182 aaPredicted RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 TMEM151AQ8N4L1 468 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 NLGN2Q8NFZ4 835 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 CPNE2Q96FN4 548 aaPredicted RBP14.95□□□□□ -0.02
CHD4-210ENST00000544040 MAN2C1Q9NTJ4 1040 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 COQ3Q9NZJ6 369 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 FETUBQ9UGM5 382 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 PCDHGB6Q9Y5F9 930 aa14.95□□□□□ -0.02
CHD4-210ENST00000544040 SOX1O00570 391 aaPredicted RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 AGR2O95994 175 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 APOC3P02656 99 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 GATSQ8NAP1 163 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 GNPDA2Q8TDQ7 276 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 TTYH3Q9C0H2 523 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 LDAHQ9H6V9 325 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 NUFIP1Q9UHK0 495 aaKnown RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 TLR6Q9Y2C9 796 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 C8AP07357 584 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 F8A1P23610 371 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 GRPRP30550 384 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 MEF2AQ02078 507 aaPredicted RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 PPP1R3AQ16821 1122 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 COL28A1Q2UY09 1125 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 NPAS4Q8IUM7 802 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 LRCH3Q96II8 777 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 MAFBQ9Y5Q3 323 aaPredicted RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 CD8B2A6NJW9 211 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 CD8BP10966 210 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 INHBEP58166 350 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 LASP1Q14847 261 aaKnown RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 SH3RF2Q8TEC5 729 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 MEAF6Q9HAF1 191 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 MGAT4CQ9UBM8 478 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 A0A0A6YYH2 397 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 A6NJ64 397 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 BOLA2-SMG1P6H3BVE0 249 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 HTRA2O43464 458 aaPredicted RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 MAPK3P27361 379 aaPredicted RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 SNU13P55769 128 aaKnown RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 ASCC1Q8N9N2 400 aaKnown RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 OR6C4Q8NGE1 309 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 KLHL15Q96M94 604 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 NECAB3Q96P71 396 aaPredicted RBP14.94□□□□□ -0.02
CHD4-210ENST00000544040 EFCAB11Q9BUY7 163 aa14.94□□□□□ -0.02
CHD4-210ENST00000544040 SIX2Q9NPC8 291 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms