RNA–Protein interactions for RNA: ENST00000533632.5

TRAPPC4-214, Transcript of trafficking protein particle complex 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC4, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-214ENST00000533632 CHRNA10Q9GZZ6 450 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 RHBGQ9H310 441 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 ELOVL6Q9H5J4 265 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 CCL27Q9Y4X3 112 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 NEUROG3Q9Y4Z2 214 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 PCDHGA11Q9Y5H2 935 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 ZFHX4Q86UP3 3567 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 MAGEB17A8MXT2 336 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 H0YGG7 62 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 PEX11AO75192 247 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 SH3BGRLO75368 114 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 SNRPB2P08579 225 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 GPX3P22352 226 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 CXCR2P25025 360 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 GRK3P35626 688 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 ARF3P61204 181 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 RPS15AP62244 130 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 EMX2Q04743 252 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 HYAL2Q12891 473 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 GPR19Q15760 415 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 C6orf136Q5SQH8 315 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 KMT5CQ86Y97 462 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 SELENOMQ8WWX9 145 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 DEPDC7Q96QD5 511 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 ACPTQ9BZG2 426 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 BRINP2Q9C0B6 783 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 PDE7BQ9NP56 450 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 DMRT3Q9NQL9 472 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 AIG1Q9NVV5 245 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 SIDT1Q9NXL6 827 aaKnown RBP12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 GIMAP2Q9UG22 337 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 MSRB2Q9Y3D2 182 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 TSC22D4Q9Y3Q8 395 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 AP1M2Q9Y6Q5 423 aa12.79□□□□□ -0.36
TRAPPC4-214ENST00000533632 IGF2RP11717 2491 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 BBIP1A8MTZ0 92 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 C4orf51C9J302 202 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 NPIPB8E9PQR5 432 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 H3BMH7 237 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 HNRNPH1P31943 449 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 AHRP35869 848 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 RPS13P62277 151 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 HMGCS1Q01581 520 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 CUL3Q13618 768 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 HIST2H2ACQ16777 129 aaPredicted RBP12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 HKDC1Q2TB90 917 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 PDCD4Q53EL6 469 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 AGKQ53H12 422 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 WASHC2DQ5SRD0 308 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 HIST2H2AA3Q6FI13 130 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 MCATQ8IVS2 390 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 FNDC5Q8NAU1 212 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 TM4SF19Q96DZ7 209 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 MARK4Q96L34 752 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 MRPL1Q9BYD6 325 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 STARD5Q9NSY2 213 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 OCIAD1Q9NX40 245 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 NOP53Q9NZM5 478 aaKnown RBP12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 ZIM2Q9NZV7 527 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 GPR45Q9Y5Y3 372 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 SCN3AQ9NY46 2000 aa12.78□□□□□ -0.36
TRAPPC4-214ENST00000533632 DYTNA2CJ06 578 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 LSM1O15116 133 aaKnown RBP12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 NDUFS4O43181 175 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 PIK3CBP42338 1070 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 ART3Q13508 389 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 NR6A1Q15406 480 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 IMPG1Q17R60 797 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 COQ5Q5HYK3 327 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 FAM9CQ8IZT9 166 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 KCT2Q8NC54 265 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 UBE2E3Q969T4 207 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 REPS1Q96D71 796 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 LIN37Q96GY3 246 aaPredicted RBP12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 METTL2AQ96IZ6 378 aaKnown RBP12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 ZNF285Q96NJ3 590 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 MS4A8Q9BY19 250 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 KLHL31Q9H511 634 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 ASIC5Q9NY37 505 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 CCDC167Q9P0B6 97 aa12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 PRPF19Q9UMS4 504 aaKnown RBP12.77□□□□□ -0.36
TRAPPC4-214ENST00000533632 DMXL2Q8TDJ6 3036 aa12.77□□□□□ -0.37
TRAPPC4-214ENST00000533632 FER1L5A0AVI2 2057 aa12.77□□□□□ -0.37
TRAPPC4-214ENST00000533632 FOXE1O00358 373 aaPredicted RBP12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 RSL1D1O76021 490 aaKnown RBP12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 MED26O95402 600 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 TGFB1P01137 390 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 SERPIND1P05546 499 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 HSD3B1P14060 373 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 ACPPP15309 386 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 PRPH2P23942 346 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 HSD3B2P26439 372 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 ARL4DP49703 201 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 TRA2AQ13595 282 aaKnown RBP eCLIP12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 AP5B1Q2VPB7 878 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 HACD2Q6Y1H2 254 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 ASPGQ86U10 573 aa12.76□□□□□ -0.37
TRAPPC4-214ENST00000533632 SCUBE1Q8IWY4 988 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms