RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 OTX2P32243 289 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 OR1D4P47884 311 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 NAGLUP54802 743 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 CLCQ05315 142 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 DSG2Q14126 1118 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 PCLAFQ15004 111 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 NDUFA9Q16795 377 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 LIPMQ5VYY2 423 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 TTC19Q6DKK2 380 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 TMIGD1Q6UXZ0 262 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 PRICKLE2Q7Z3G6 844 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 MILR1Q7Z6M3 343 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 ASPGQ86U10 573 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 PTRH1Q86Y79 214 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 NUDCD3Q8IVD9 361 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 CAMKVQ8NCB2 501 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 OR4K1Q8NGD4 311 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 SLC13A3Q8WWT9 602 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 UBE2E3Q969T4 207 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 TM4SF19Q96DZ7 209 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 L3HYPDHQ96EM0 354 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 MOCOSQ96EN8 888 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 VPS50Q96JG6 964 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 PKNOX2Q96KN3 472 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 SMAD5Q99717 465 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 MECRQ9BV79 373 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 TGIF2Q9GZN2 237 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 SPNS1Q9H2V7 528 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZNF446Q9NWS9 450 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 OXSMQ9NWU1 459 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 C5AR2Q9P296 337 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 GCN1Q92616 2671 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 HEATR5BQ9P2D3 2071 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 ANKDD1BA6NHY2 528 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 HMGB1P1B2RPK0 211 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 PCDH17O14917 1159 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 NDUFS4O43181 175 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 FOXS1O43638 330 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 TRIM13O60858 407 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 CRCPO75575 148 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 CLDN9O95484 217 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 PDGFAP04085 211 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 ZGLP1P0C6A0 271 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 SLC35G6P0C7Q6 338 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 HNF4AP41235 474 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 SCTRP47872 440 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 PGDP52209 483 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 DNAJB13P59910 316 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 OCA2Q04671 838 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 RGS1Q08116 209 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 CHAF1BQ13112 559 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 DDX39BQ13838 428 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 TBCCQ15814 346 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 CPSF6Q16630 551 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 HKDC1Q2TB90 917 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 HSP90B2PQ58FF3 399 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 TTMPQ5BVD1 217 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 LIPJQ5W064 366 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 MED27Q6P2C8 311 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 VN1R4Q7Z5H5 301 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 TEX19Q8NA77 164 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 CLEC1AQ8NC01 280 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 FDCSPQ8NFU4 85 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 TTLQ8NG68 377 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 STT3BQ8TCJ2 826 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 COL26A1Q96A83 441 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 MIEF2Q96C03 454 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 CDK15Q96Q40 435 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 SH3GL2Q99962 352 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 MACROD1Q9BQ69 325 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 PITHD1Q9GZP4 211 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 GPR83Q9NYM4 423 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 CTSFQ9UBX1 484 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 ZFP69BQ9UJL9 534 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 STK38LQ9Y2H1 464 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 RNF11Q9Y3C5 154 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 ZNF451Q9Y4E5 1061 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 MAP4K5Q9Y4K4 846 aa12.27□□□□□ -0.45
TRAPPC4-212ENST00000533058 A0A1W2PQ72 361 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 H0YIG0 161 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 SOCS6O14544 535 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 OR7A17O14581 309 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 FFAR3O14843 346 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 GPR42O15529 346 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 P2RX6O15547 441 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 PRAMEF4O60810 478 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 WISP1O95388 367 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 BPGMP07738 259 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 CYC1P08574 325 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 CD22P20273 847 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 FBLP22087 321 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 AHRP35869 848 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 CASP2P42575 452 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 SERPINB4P48594 390 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 NAA20P61599 178 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 PHEXP78562 749 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 LCP2Q13094 533 aa12.26□□□□□ -0.45
TRAPPC4-212ENST00000533058 PRAMEF9Q5VWM5 478 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms