RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 IFFO1Q0D2I5 559 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 TRAF3Q13114 568 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 DDX39BQ13838 428 aaKnown RBP11.02□□□□□ -0.65
UBA3-211ENST00000493957 SSPNQ14714 243 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 UNC50Q53HI1 259 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 FAAH2Q6GMR7 532 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 UBE3DQ7Z6J8 389 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 TRABD2AQ86V40 505 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 RAB43Q86YS6 212 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 MYLK4Q86YV6 388 aaPredicted RBP11.02□□□□□ -0.65
UBA3-211ENST00000493957 LAS2Q8IYD9 372 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 OR7G3Q8NG95 312 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 OR51Q1Q8NH59 317 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 ZNF483Q8TF39 744 aaPredicted RBP11.02□□□□□ -0.65
UBA3-211ENST00000493957 ZNF473Q8WTR7 871 aaKnown RBP11.02□□□□□ -0.65
UBA3-211ENST00000493957 APOBEC4Q8WW27 367 aaKnown RBP11.02□□□□□ -0.65
UBA3-211ENST00000493957 MIEF2Q96C03 454 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 C8orf44Q96CB5 159 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 MS4A6EQ96DS6 147 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 PEX11GQ96HA9 241 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 TMEM237Q96Q45 408 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 F2RL3Q96RI0 385 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 CRB3Q9BUF7 120 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 RHBGQ9H310 441 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 ACTR8Q9H981 624 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 PPCSQ9HAB8 311 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 SEMA4BQ9NPR2 832 aaPredicted RBP11.02□□□□□ -0.65
UBA3-211ENST00000493957 LGALS13Q9UHV8 139 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 C3orf18Q9UK00 162 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 CFAP46Q8IYW2 2715 aa11.02□□□□□ -0.65
UBA3-211ENST00000493957 SPTA1P02549 2419 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 LRIT2A6NDA9 550 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 ANKDD1BA6NHY2 528 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 G3V2L1 256 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 RTCAO00442 366 aaKnown RBP11.01□□□□□ -0.65
UBA3-211ENST00000493957 PRPF4O43172 522 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBA3-211ENST00000493957 ERI3O43414 337 aaKnown RBP11.01□□□□□ -0.65
UBA3-211ENST00000493957 CHST10O43529 356 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 PLIN3O60664 434 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 GLRA3O75311 464 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 CLEC3AO75596 197 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 C1QL1O75973 258 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 BMP10O95393 424 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 GSTA1P08263 222 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 ATP5F1P24539 256 aaPredicted RBP11.01□□□□□ -0.65
UBA3-211ENST00000493957 CCR10P46092 362 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 XCR1P46094 333 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 OCA2Q04671 838 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 SLC18A2Q05940 514 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 ZNF844Q08AG5 666 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 CPSF6Q16630 551 aaKnown RBP eCLIP11.01□□□□□ -0.65
UBA3-211ENST00000493957 PAGE2BQ5JRK9 111 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 MED27Q6P2C8 311 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 KIRREL2Q6UWL6 708 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 LCA5Q86VQ0 697 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 SRRM1Q8IYB3 904 aaKnown RBP11.01□□□□□ -0.65
UBA3-211ENST00000493957 THAP4Q8WY91 577 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 GAL3ST3Q96A11 431 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 QRFPRQ96P65 431 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 ARHGAP9Q9BRR9 750 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 SORBS1Q9BX66 1292 aaKnown RBP11.01□□□□□ -0.65
UBA3-211ENST00000493957 MS4A8Q9BY19 250 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 FAM117AQ9C073 453 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 MKKSQ9NPJ1 570 aaPredicted RBP11.01□□□□□ -0.65
UBA3-211ENST00000493957 P4HTMQ9NXG6 502 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 ZNF225Q9UK10 706 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 FBXL4Q9UKA2 621 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 NXT1Q9UKK6 140 aaKnown RBP11.01□□□□□ -0.65
UBA3-211ENST00000493957 TMCO1Q9UM00 188 aa11.01□□□□□ -0.65
UBA3-211ENST00000493957 TNPO3Q9Y5L0 923 aaKnown RBP11.01□□□□□ -0.65
UBA3-211ENST00000493957 IDSB3KWA1 339 aa11□□□□□ -0.65
UBA3-211ENST00000493957 FAM227AF5H4B4 570 aa11□□□□□ -0.65
UBA3-211ENST00000493957 SAP18O00422 153 aaKnown RBP11□□□□□ -0.65
UBA3-211ENST00000493957 COPEO14579 308 aa11□□□□□ -0.65
UBA3-211ENST00000493957 SPAG7O75391 227 aa11□□□□□ -0.65
UBA3-211ENST00000493957 CDC123O75794 336 aaPredicted RBP11□□□□□ -0.65
UBA3-211ENST00000493957 ETHE1O95571 254 aa11□□□□□ -0.65
UBA3-211ENST00000493957 TGFB1P01137 390 aa11□□□□□ -0.65
UBA3-211ENST00000493957 PDGFAP04085 211 aa11□□□□□ -0.65
UBA3-211ENST00000493957 TAC1P20366 129 aa11□□□□□ -0.65
UBA3-211ENST00000493957 MMP11P24347 488 aa11□□□□□ -0.65
UBA3-211ENST00000493957 CERS1P27544 350 aa11□□□□□ -0.65
UBA3-211ENST00000493957 CRHR1P34998 444 aa11□□□□□ -0.65
UBA3-211ENST00000493957 ARL1P40616 181 aaPredicted RBP11□□□□□ -0.65
UBA3-211ENST00000493957 NEK2P51955 445 aa11□□□□□ -0.65
UBA3-211ENST00000493957 CCNG1P51959 295 aa11□□□□□ -0.65
UBA3-211ENST00000493957 PLA2G16P53816 162 aa11□□□□□ -0.65
UBA3-211ENST00000493957 HERVK_113P63132 956 aa11□□□□□ -0.65
UBA3-211ENST00000493957 BTN3A2P78410 334 aa11□□□□□ -0.65
UBA3-211ENST00000493957 EEF1A2Q05639 463 aaKnown RBP11□□□□□ -0.65
UBA3-211ENST00000493957 KCNAB2Q13303 367 aa11□□□□□ -0.65
UBA3-211ENST00000493957 LAPTM5Q13571 262 aa11□□□□□ -0.65
UBA3-211ENST00000493957 RAPSNQ13702 412 aa11□□□□□ -0.65
UBA3-211ENST00000493957 RUNX2Q13950 521 aa11□□□□□ -0.65
UBA3-211ENST00000493957 HERC3Q15034 1050 aa11□□□□□ -0.65
UBA3-211ENST00000493957 ZRSR2Q15696 482 aaKnown RBP11□□□□□ -0.65
UBA3-211ENST00000493957 RBBP7Q16576 425 aa11□□□□□ -0.65
UBA3-211ENST00000493957 HIST2H2ACQ16777 129 aaPredicted RBP11□□□□□ -0.65
UBA3-211ENST00000493957 ADPRMQ3LIE5 342 aa11□□□□□ -0.65
UBA3-211ENST00000493957 ZNF678Q5SXM1 525 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms