RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 CLDN19Q8N6F1 224 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 RNF148Q8N7C7 305 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 EXTL1Q92935 676 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 KIAA1143Q96AT1 154 aaPredicted RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 EFHD2Q96C19 240 aaPredicted RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 ROPN1LQ96C74 230 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 OR6C1Q96RD1 312 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 GPR22Q99680 433 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 NPAS2Q99743 824 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 CIB1Q99828 191 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 NEURL2Q9BR09 285 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 ARHGAP9Q9BRR9 750 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 CCM2Q9BSQ5 444 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 SLC25A23Q9BV35 468 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 ADI1Q9BV57 179 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 SPRY4Q9C004 299 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 SEMA4CQ9C0C4 833 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 RAB33BQ9H082 229 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 SEMA6AQ9H2E6 1030 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 CCM2LQ9NUG4 571 aaPredicted RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 ATAD3AQ9NVI7 634 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 HRASLS2Q9NWW9 162 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 EPHA6Q9UF33 1036 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 ZDHHC2Q9UIJ5 367 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 GPC6Q9Y625 555 aaPredicted RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 COLEC10Q9Y6Z7 277 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 COL6A6A6NMZ7 2263 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 ZNF462Q96JM2 2506 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 IGLV3-16A0A075B6K0 115 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 TRBV5-4A0A0C4DH59 114 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 OR6C74A6NCV1 312 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 BBIP1A8MTZ0 92 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 E7ENX8 843 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 STX16-NPEPL1H3BU86 382 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 H7C0S8 307 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 KPNA4O00629 521 aaPredicted RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 SDHDO14521 159 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 ATE1O95260 518 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 MSX2P35548 267 aaPredicted RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 NPY2RP49146 381 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 DNAJB13P59910 316 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 RPS3AP61247 264 aaKnown RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 CRADDP78560 199 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 REP15Q6BDI9 236 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 ARMC6Q6NXE6 501 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 ZNF786Q8N393 782 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 TMEM151AQ8N4L1 468 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 KLHL6Q8WZ60 621 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 MED8Q96G25 268 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 FERD3LQ96RJ6 166 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 SH3GL1Q99961 368 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 ULBP3Q9BZM4 244 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 MUC13Q9H3R2 512 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 NOL11Q9H8H0 719 aaKnown RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 GPN2Q9H9Y4 310 aaPredicted RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 ERGIC3Q9Y282 383 aa10.31□□□□□ -0.76
DDX56-212ENST00000485367 TMEM184BQ9Y519 407 aaPredicted RBP10.31□□□□□ -0.76
DDX56-212ENST00000485367 IGHV5-51A0A0C4DH38 117 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 ZCWPW2A0A1B0GU75 182 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 C17orf113A0A1B0GUU1 675 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 OR5K3A6NET4 321 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 OR51F1A6NGY5 319 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 TARM1B6A8C7 271 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 ITGB2P05107 769 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 ZNF28P17035 718 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 JUNBP17275 347 aaPredicted RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 NELFEP18615 380 aaKnown RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 TCN1P20061 433 aaPredicted RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 IL10P22301 178 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 GABRB3P28472 473 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 ARCN1P48444 511 aaKnown RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 ARL4DP49703 201 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 TMED10P49755 219 aaKnown RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 BNIP2Q12982 314 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 IL11RAQ14626 422 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 TBR1Q16650 682 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 LINC00303Q3SY05 128 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 C6orf10Q5SRN2 563 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 OOSP2Q86WS3 158 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 RASGRP3Q8IV61 690 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 EXD3Q8N9H8 876 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 OR4E2Q8NGC2 313 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 ZFPM2Q8WW38 1151 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 PPWD1Q96BP3 646 aaKnown RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 ZNF669Q96BR6 464 aaPredicted RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 VPS39Q96JC1 886 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 DCUN1D5Q9BTE7 237 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 SLC12A9Q9BXP2 914 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 TRIT1Q9H3H1 467 aaKnown RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 RHOJQ9H4E5 214 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 KIR3DX1Q9H7L2 352 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 PARVBQ9HBI1 364 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 CASS4Q9NQ75 786 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 CDC14AQ9UNH5 594 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 HEMK1Q9Y5R4 338 aaPredicted RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 HEBP2Q9Y5Z4 205 aa10.3□□□□□ -0.76
DDX56-212ENST00000485367 HELZ2Q9BYK8 2649 aaKnown RBP10.3□□□□□ -0.76
DDX56-212ENST00000485367 LOC101059948A0A1B0GTJ6 334 aa10.29□□□□□ -0.76
DDX56-212ENST00000485367 UBA6A0AVT1 1052 aaPredicted RBP10.29□□□□□ -0.76
DDX56-212ENST00000485367 PRORSD1PA6NEY8 169 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms