RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TMEM30AQ9NV96 361 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 OXSMQ9NWU1 459 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 FBXW11Q9UKB1 542 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 PCDHA11Q9Y5I1 949 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 USP3Q9Y6I4 520 aa12.21□□□□□ -0.45
RTFDC1-207ENST00000477573 TRBV23-1A0A0A0MS06 115 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 SMLR1H3BR10 107 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 SCAMP1O15126 338 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 GPR37O15354 613 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 XPNPEP2O43895 674 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 HCN1O60741 890 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 RLN2P04090 185 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ZDHHC11BP0C7U3 371 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 COX5BP10606 129 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 RAB4AP20338 218 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 C4BPBP20851 252 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 CD79BP40259 229 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ATP4BP51164 291 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 CLDN20P56880 219 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ZNF79Q15937 498 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 AARDQ4LEZ3 155 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 BSPRYQ5W0U4 402 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 NCBP2-AS2Q69YL0 99 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 RGS7BPQ6MZT1 257 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 PLBD1Q6P4A8 553 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 DLEU7Q6UYE1 221 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 TMPRSS11AQ6ZMR5 421 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 RIMKLAQ8IXN7 391 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 FAM126BQ8IXS8 530 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 PYROXD2Q8N2H3 581 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 LNX2Q8N448 690 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 TMIEQ8NEW7 156 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 DMBX1Q8NFW5 382 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 RNASE11Q8TAA1 199 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 HMGCLL1Q8TB92 370 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 AGR3Q8TD06 166 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 MTERF3Q96E29 417 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 MFSD3Q96ES6 412 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 QRFPRQ96P65 431 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 SIGLEC11Q96RL6 698 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 TWSG1Q9GZX9 223 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 WDCPQ9H6R7 721 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 SMURF1Q9HCE7 757 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 NDUFAF4Q9P032 175 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 RUVBL2Q9Y230 463 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 AIPO00170 330 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 SDHDO14521 159 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 CBX7O95931 251 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 KLK3P07288 261 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ARSBP15848 533 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 FSHRP23945 695 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 GADD45AP24522 165 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 PTBP1P26599 531 aaKnown RBP eCLIP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 MAGEA12P43365 314 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 UBE2IP63279 158 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 PITX1P78337 314 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 LBHQ53QV2 105 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 MZT2BQ6NZ67 158 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 KLHL17Q6TDP4 642 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 SLC16A13Q7RTY0 426 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 SLC46A3Q7Z3Q1 461 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ADGRD2Q7Z7M1 963 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 LHFPL3Q86UP9 236 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 OXR1Q8N573 874 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 C11orf65Q8NCR3 313 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 BVESQ8NE79 360 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 METTL6Q8TCB7 284 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 KIAA1143Q96AT1 154 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 COQ8BQ96D53 544 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 FUBP3Q96I24 572 aaKnown RBP eCLIP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 NEU1Q99519 415 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 EBNA1BP2Q99848 306 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 MARVELD1Q9BSK0 173 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 COLEC11Q9BWP8 271 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ZNF768Q9H5H4 540 aaKnown RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 FOLH1BQ9HBA9 442 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ZNF334Q9HCZ1 680 aaPredicted RBP12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ZFP64Q9NPA5 681 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 EGFL7Q9UHF1 273 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 ADAM28Q9UKQ2 775 aa12.2□□□□□ -0.46
RTFDC1-207ENST00000477573 E9PAM4 449 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 G3V2T6 193 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 CBX4O00257 560 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 VEGFDO43915 354 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 CDC123O75794 336 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 CHRNGP07510 517 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 GNSP15586 552 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PBLDP30039 288 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PIGAP37287 484 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 RABGGTBP53611 331 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 NHLRC3Q5JS37 347 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 LIPMQ5VYY2 423 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 SHFQ7M4L6 423 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 RNF130Q86XS8 419 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 TAB3Q8N5C8 712 aaPredicted RBP12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 DBF4BQ8NFT6 615 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 HTR3CQ8WXA8 447 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 HGDQ93099 445 aa12.19□□□□□ -0.46
RTFDC1-207ENST00000477573 PPP1R36Q96LQ0 422 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms