RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 ZKSCAN8Q15776 578 aaPredicted RBP14.37□□□□□ -0.11
CHD3-205ENST00000449744 INAQ16352 499 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 C8orf74Q6P047 294 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 SLCO4C1Q6ZQN7 724 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 ZNF572Q7Z3I7 529 aaPredicted RBP14.37□□□□□ -0.11
CHD3-205ENST00000449744 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHD3-205ENST00000449744 CYP4X1Q8N118 509 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 SNX31Q8N9S9 440 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 FBF1Q8TES7 1133 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 CREB3L4Q8TEY5 395 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 EXT2Q93063 718 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 TMEM79Q9BSE2 394 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 KLHL31Q9H511 634 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 PRM3Q9NNZ6 103 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 MMP25Q9NPA2 562 aa14.37□□□□□ -0.11
CHD3-205ENST00000449744 CTAGE15A4D2H0 777 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 ANKDD1BA6NHY2 528 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 TAPBPO15533 448 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 PRMT3O60678 531 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 STK16O75716 305 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 FAM155BO75949 473 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 URI1O94763 535 aaPredicted RBP14.36□□□□□ -0.11
CHD3-205ENST00000449744 C1QAP02745 245 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 SMIM10L1P0DMW3 83 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 HPDP32754 393 aaPredicted RBP14.36□□□□□ -0.11
CHD3-205ENST00000449744 GGT5P36269 586 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 HSPA7P48741 367 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 TAS2R50P59544 299 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 BTN3A2P78410 334 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 SLC7A5Q01650 507 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 OR4D1Q15615 310 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 MEP1AQ16819 746 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 C4orf17Q53FE4 359 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 FBXO48Q5FWF7 155 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 ACER2Q5QJU3 275 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 FCRLBQ6BAA4 426 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 QSOX2Q6ZRP7 698 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 TBC1D1Q86TI0 1168 aaPredicted RBP14.36□□□□□ -0.11
CHD3-205ENST00000449744 CTAGE6Q86UF2 777 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 ARMC2Q8NEN0 867 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 STAG3L4Q8TBR4 150 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 GAL3ST3Q96A11 431 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 KIAA1191Q96A73 305 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 ESAMQ96AP7 390 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 SMIM10Q96HG1 83 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 SEC16BQ96JE7 1060 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 PITHD1Q9GZP4 211 aaPredicted RBP14.36□□□□□ -0.11
CHD3-205ENST00000449744 NT5DC2Q9H857 520 aa14.36□□□□□ -0.11
CHD3-205ENST00000449744 PLEKHB1Q9UF11 243 aaPredicted RBP14.36□□□□□ -0.11
CHD3-205ENST00000449744 ERRFI1Q9UJM3 462 aaPredicted RBP14.36□□□□□ -0.11
CHD3-205ENST00000449744 A0A088AWK7 358 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 E2F3O00716 465 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 CCNT2O60583 730 aaKnown RBP14.35□□□□□ -0.11
CHD3-205ENST00000449744 PRAMEF2O60811 474 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 RASAL1O95294 804 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 ZNF10P21506 573 aaPredicted RBP14.35□□□□□ -0.11
CHD3-205ENST00000449744 CRABP2P29373 138 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 SLC26A5P58743 744 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 PDK4Q16654 411 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 XKR6Q5GH73 641 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 H3F3CQ6NXT2 135 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 CRLF3Q8IUI8 442 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 BEST3Q8N1M1 668 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 CA13Q8N1Q1 262 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 SLC5A8Q8N695 610 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 PDPRQ8NCN5 879 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 PTCD3Q96EY7 689 aaKnown RBP14.35□□□□□ -0.11
CHD3-205ENST00000449744 UBXN10Q96LJ8 280 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 C16orf45Q96MC5 204 aaPredicted RBP14.35□□□□□ -0.11
CHD3-205ENST00000449744 SLX1AQ9BQ83 275 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 EHD1Q9H4M9 534 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 ALG9Q9H6U8 611 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 NMRAL1Q9HBL8 299 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 PRDM9Q9NQV7 894 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 OSGIN2Q9Y236 505 aa14.35□□□□□ -0.11
CHD3-205ENST00000449744 SPTBN1Q01082 2364 aaKnown RBP14.35□□□□□ -0.11
CHD3-205ENST00000449744 SPTAN1Q13813 2472 aaKnown RBP14.35□□□□□ -0.11
CHD3-205ENST00000449744 NOTCH2Q04721 2471 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 CPAMD8Q8IZJ3 1885 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 A0A0G2JN53 185 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 ESYT3A0FGR9 886 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 A1L4Q6 167 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 ERI3O43414 337 aaKnown RBP14.34□□□□□ -0.11
CHD3-205ENST00000449744 CLEC3AO75596 197 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 CRYABP02511 175 aaKnown RBP14.34□□□□□ -0.11
CHD3-205ENST00000449744 LTA4HP09960 611 aaKnown RBP14.34□□□□□ -0.11
CHD3-205ENST00000449744 RNF224P0DH78 156 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 TFEBP19484 476 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 MAOAP21397 527 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 BTG2P78543 158 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 EFTUD2Q15029 972 aaKnown RBP eCLIP14.34□□□□□ -0.11
CHD3-205ENST00000449744 HIST2H2ACQ16777 129 aaPredicted RBP14.34□□□□□ -0.11
CHD3-205ENST00000449744 PAGE2BQ5JRK9 111 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 HIST2H2AA3Q6FI13 130 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 TRIM40Q6P9F5 258 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 CMC1Q7Z7K0 106 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 NR4A3Q92570 626 aa14.34□□□□□ -0.11
CHD3-205ENST00000449744 MRRFQ96E11 262 aaKnown RBP14.34□□□□□ -0.11
CHD3-205ENST00000449744 TAAR6Q96RI8 345 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms