RNA–Protein interactions for RNA: ENST00000440346.1

PTPA-221, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-221ENST00000440346 PRAMEF9Q5VWM5 478 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 NIPAL1Q6NVV3 410 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 MED27Q6P2C8 311 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 C6orf15Q6UXA7 325 aaPredicted RBP6.78□□□□□ -1.32
PTPA-221ENST00000440346 MCATQ8IVS2 390 aaKnown RBP6.78□□□□□ -1.32
PTPA-221ENST00000440346 TRIM42Q8IWZ5 723 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 FAM20CQ8IXL6 584 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 GPR135Q8IZ08 494 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 ARFGAP2Q8N6H7 521 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 MFSD9Q8NBP5 474 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 CAMKVQ8NCB2 501 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 OR4F6Q8NGB9 312 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 AGAP11Q8TF27 550 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 ATP6V1E2Q96A05 226 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 RERGQ96A58 199 aaPredicted RBP6.78□□□□□ -1.32
PTPA-221ENST00000440346 TM4SF19Q96DZ7 209 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 NSUN5Q96P11 429 aaKnown RBP6.78□□□□□ -1.32
PTPA-221ENST00000440346 SELENOSQ9BQE4 189 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 GATA5Q9BWX5 397 aaPredicted RBP6.78□□□□□ -1.32
PTPA-221ENST00000440346 SLC29A3Q9BZD2 475 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 DRC3Q9H069 523 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 KLHL25Q9H0H3 589 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 RHBGQ9H310 441 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 ACTR8Q9H981 624 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 EML4Q9HC35 981 aaKnown RBP6.78□□□□□ -1.32
PTPA-221ENST00000440346 SRPK3Q9UPE1 567 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 POLHQ9Y253 713 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 KLHL20Q9Y2M5 609 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 PCDHGA6Q9Y5G7 932 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 POLEQ07864 2286 aa6.78□□□□□ -1.32
PTPA-221ENST00000440346 ABCA12Q86UK0 2595 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 SVILO95425 2214 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 TEP1Q99973 2627 aaKnown RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 FEZF1A0PJY2 475 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 SERTM1A2A2V5 107 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 URADA6NGE7 173 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ANKDD1BA6NHY2 528 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 TMEM150CB9EJG8 249 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 H0YGG7 62 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 KLF11O14901 512 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 OR1F1O43749 312 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 LCMT2O60294 686 aaKnown RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 NRP2O60462 931 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 CLEC3AO75596 197 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 CREG1O75629 220 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 OR2B3O76000 313 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 KIAA0754O94854 1291 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 TIAF1O95411 115 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 SERPINE1P05121 402 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 SERPINA6P08185 405 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 FGF4P08620 206 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 CD22P20273 847 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 VARSP26640 1264 aaKnown RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 BCL6P41182 706 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 PIK3CBP42338 1070 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 UQCRFS1P47985 274 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 CDH13P55290 713 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 WDR4P57081 412 aaKnown RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 ARF3P61204 181 aaPredicted RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 PHEXP78562 749 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 MEF2AQ02078 507 aaPredicted RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 DNASE1L3Q13609 305 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 RCN2Q14257 317 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 SLBPQ14493 270 aaKnown RBP eCLIP6.77□□□□□ -1.33
PTPA-221ENST00000440346 KCNAB1Q14722 419 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 GRM7Q14831 915 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 PRTGQ2VWP7 1150 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 DEFB110Q30KQ9 67 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ATG16L1Q676U5 607 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 FRMPD2BQ6IN97 320 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 RHBDD2Q6NTF9 364 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 RNF165Q6ZSG1 346 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 GPRIN3Q6ZVF9 776 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ASB18Q6ZVZ8 466 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 VN1R4Q7Z5H5 301 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 MILR1Q7Z6M3 343 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ASPGQ86U10 573 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ATCAYQ86WG3 371 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 APLFQ8IW19 511 aaPredicted RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 CCNYL1Q8N7R7 359 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ANKRD42Q8N9B4 389 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ANKRD53Q8N9V6 530 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 TTC29Q8NA56 475 aaPredicted RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 TEX19Q8NA77 164 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 OR7G3Q8NG95 312 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 OR52B6Q8NGF0 335 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 OR1L3Q8NH93 324 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 PPP1R14CQ8TAE6 165 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 WDR20Q8TBZ3 569 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 NT5CQ8TCD5 201 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 TRPC4APQ8TEL6 797 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 CT55Q8WUE5 264 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 SLC13A3Q8WWT9 602 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 ZBTB9Q96C00 473 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 MVB12AQ96EY5 273 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 LRFN5Q96NI6 719 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 DPH2Q9BQC3 489 aaPredicted RBP6.77□□□□□ -1.33
PTPA-221ENST00000440346 MECRQ9BV79 373 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 TRIM55Q9BYV6 548 aa6.77□□□□□ -1.33
PTPA-221ENST00000440346 SPNS1Q9H2V7 528 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms