RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 SLC19A1P41440 591 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 PLA2G16P53816 162 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 PDK3Q15120 406 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 FAM98BQ52LJ0 330 aaKnown RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 KIAA1614Q5VZ46 1190 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 KIAA0895LQ68EN5 471 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 LPCAT2Q7L5N7 544 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 AMIGO1Q86WK6 493 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 DEFB119Q8N690 84 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 CXorf40BQ96DE9 158 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 MSANTD3Q96H12 275 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 NR1H4Q96RI1 486 aaPredicted RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 BHLHE41Q9C0J9 482 aaPredicted RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 AICDAQ9GZX7 198 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 SYNPO2LQ9H987 977 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 AHSPQ9NZD4 102 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 C5AR2Q9P296 337 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 CNOT11Q9UKZ1 510 aaKnown RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 ZNF232Q9UNY5 417 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 AP3M1Q9Y2T2 418 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 RNASET2O00584 256 aaKnown RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 MAN2B1O00754 1011 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 SCELO95171 688 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 KCNK5O95279 499 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 CELA2BP08218 269 aaPredicted RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 ALDH9A1P49189 494 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 MAPK12P53778 367 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 YPEL5P62699 121 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 CHRNB3Q05901 458 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 PDE7AQ13946 482 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 COL9A2Q14055 689 aaPredicted RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 UBXN2BQ14CS0 331 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 PTCRAQ6ISU1 281 aaPredicted RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 ANGPTL8Q6UXH0 198 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 SYT13Q7L8C5 426 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 GPR155Q7Z3F1 870 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 UBE3DQ7Z6J8 389 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 CREB3L4Q8TEY5 395 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 HLA-CQ95604 372 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 TMEM121BQ9BXQ6 578 aaPredicted RBP15.92■□□□□ 0.14
USHBP1-203ENST00000431146 KLHL31Q9H511 634 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 MIEF1Q9NQG6 463 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 UBAP1Q9NZ09 502 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 DLGAP2Q9P1A6 1054 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 KLF15Q9UIH9 416 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 ACSL6Q9UKU0 697 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 RAB26Q9ULW5 256 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 MAPRE3Q9UPY8 281 aa15.92■□□□□ 0.14
USHBP1-203ENST00000431146 PRAMEF26H0Y7S4 382 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 TNFRSF10CO14798 259 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 LDLRP01130 860 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 CHRM5P08912 532 aaPredicted RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 RAP2AP10114 183 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 FCGR1AP12314 374 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 GPX2P18283 190 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 HNRNPFP52597 415 aaKnown RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ATP6AP1Q15904 470 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 LRRC23Q53EV4 343 aaPredicted RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 R3HCC1LQ7Z5L2 792 aaKnown RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 SERPINA11Q86U17 422 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 PTOV1Q86YD1 416 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ZZZ3Q8IYH5 903 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ZNF687Q8N1G0 1237 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 TSTD1Q8NFU3 115 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 OR5AK3PQ8NH89 298 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 UCN3Q969E3 161 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 SLC47A1Q96FL8 570 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ZNF597Q96LX8 424 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 C17orf62Q9BQA9 187 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 FOXQ1Q9C009 403 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 SLC6A16Q9GZN6 736 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 NT5DC2Q9H857 520 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 AASDHPPTQ9NRN7 309 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 DCAF13Q9NV06 445 aaKnown RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ATAD3AQ9NVI7 634 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 WSB2Q9NYS7 404 aaPredicted RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 TAAR2Q9P1P5 351 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 HS3ST3A1Q9Y663 406 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 RNF103-CHMP3A0A140T963 221 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 MAGEA13PA6NCF6 341 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 A6NCN8 305 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 C10orf142B7Z368 130 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 BTN3A3O00478 584 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ACOX3O15254 700 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 DENRO43583 198 aaKnown RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 TMPRSS11DO60235 418 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 SEMA3DO95025 777 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 F3P13726 295 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 MRPS35P82673 323 aaKnown RBP15.91■□□□□ 0.14
USHBP1-203ENST00000431146 PLCL1Q15111 1095 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ADRM1Q16186 407 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 PRRT3Q5FWE3 981 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 PPP4R4Q6NUP7 873 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ABI3BPQ7Z7G0 1075 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 ZFP90Q8TF47 636 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 MAL2Q969L2 176 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 TM4SF18Q96CE8 201 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 VPS4AQ9UN37 437 aa15.91■□□□□ 0.14
USHBP1-203ENST00000431146 DUSP12Q9UNI6 340 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms