RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 A0A1B0GWJ7 208 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 A0A1W2PQL4 384 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 A0A1W2PRU2 124 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 UBA6A0AVT1 1052 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SLC22A23A1A5C7 686 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 GSAPA4D1B5 854 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARRDC5A6NEK1 342 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 NAP1L6A6NFF2 107 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 A8MUA0 341 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 MYO1GB0I1T2 1018 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM233B4DJY2 109 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZNF879B4DU55 563 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SMIM22K7EJ46 135 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 K7ERI5 159 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 M0R082 166 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CBX4O00257 560 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 AP3D1O14617 1153 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 WNT9AO14904 365 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PIP5K1BO14986 540 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PER2O15055 1255 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SSNA1O43805 119 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRAMEF2O60811 474 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SDC3O75056 442 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM127O75204 238 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 NIPSNAP2O75323 286 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CLN5O75503 358 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 REM1O75628 298 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 VNN2O95498 520 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 NTSR2O95665 410 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PLATP00750 562 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SERPINA3P01011 423 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 EGFP01133 1207 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CRYABP02511 175 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 APOC3P02656 99 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 GIPP09681 153 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ALDOCP09972 364 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SBK2P0C263 348 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CLEC2LP0C7M8 214 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PRR35P0CG20 571 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 UBBP0CG47 229 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 UBCP0CG48 685 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 HNRNPLP14866 589 aaKnown RBP eCLIP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PPP3CBP16298 524 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SAT1P21673 171 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 AZGP1P25311 298 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 YWHAQP27348 245 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 HTR2AP28223 471 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RBMS1P29558 406 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 GPC1P35052 558 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 MATKP42679 507 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ASPAP45381 313 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 HNMTP50135 292 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAB5CP51148 216 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ARSDP51689 593 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 AFF1P51825 1210 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 GEMP55040 296 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CDH4P55283 916 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAZP56270 477 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR4D2P58180 307 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SPCS3P61009 180 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RAB2AP61019 212 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RPS7P62081 194 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RPS8P62241 208 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RPS27AP62979 156 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 UBA52P62987 128 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 MC2RQ01718 297 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PIGFQ07326 219 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ST3GAL4Q11206 333 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ILF3Q12906 894 aaKnown RBP eCLIP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PLD1Q13393 1074 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PICALMQ13492 652 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 GTF2H3Q13889 308 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 IL18Q14116 193 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SIM2Q14190 667 aaPredicted RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 HNF4GQ14541 408 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 IRF3Q14653 427 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SMCO1Q147U7 214 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TRAM2Q15035 370 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ZMYND11Q15326 602 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 MAPKAPK3Q16644 382 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 GUCA2BQ16661 112 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TSTQ16762 297 aaKnown RBP5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TMEM44Q2T9K0 475 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TTLL9Q3SXZ7 439 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 IQCCQ4KMZ1 466 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 KLHL26Q53HC5 615 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 C3orf38Q5JPI3 329 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 TCTE1Q5JU00 501 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RTP2Q5QGT7 225 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 HECTD3Q5T447 861 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 SUSD4Q5VX71 490 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 ANKS6Q68DC2 871 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PLAG1Q6DJT9 500 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 OR6B2Q6IFH4 312 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 LAIR2Q6ISS4 152 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 FAHD1Q6P587 224 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 PKN3Q6P5Z2 889 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 RNF165Q6ZSG1 346 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 MOB2Q70IA6 237 aa5.41□□□□□ -1.54
VTI1BP4-201ENST00000427516 CHMP1BQ7LBR1 199 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms