RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ERVMER34-1Q9H9K5 563 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 SERHLQ9NQF3 203 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 MGAT4AQ9UM21 535 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 SCML1Q9UN30 329 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 GPR182O15218 404 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 GLUD1P00367 558 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 ACADMP11310 421 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 PKMP14618 531 aaKnown RBP14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 IL1RNP18510 177 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 TACR1P25103 407 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 PNPLA4P41247 253 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 PER3P56645 1201 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 RPS14P62263 151 aaKnown RBP14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 MAD2L1Q13257 205 aaPredicted RBP14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 GLYR1Q49A26 553 aaPredicted RBP14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZRANB3Q5FWF4 1079 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF57Q68EA5 555 aaPredicted RBP14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 C22orf42Q6IC83 251 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 TEX261Q6UWH6 196 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 PTCHD4Q6ZW05 846 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 LIX1LQ8IVB5 337 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 Q8N402 240 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 TESCQ96BS2 214 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 EXOC2Q96KP1 924 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 GABARAPL3Q9BY60 117 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 KCNN2Q9H2S1 579 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 RIMKLBQ9ULI2 386 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 SSR3Q9UNL2 185 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 U3KQ87 197 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 SCN10AQ9Y5Y9 1956 aa14.16□□□□□ -0.14
NCKIPSD-204ENST00000416649 B4GALT3O60512 393 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 TSPAN12O95859 305 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 OGNP20774 298 aaKnown RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 SSTR2P30874 369 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 ATN1P54259 1190 aaPredicted RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 SPIBQ01892 262 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 RPA4Q13156 261 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 PPIGQ13427 754 aaKnown RBP eCLIP14.15□□□□□ -0.141e-6■■■■□ 20
NCKIPSD-204ENST00000416649 DDI2Q5TDH0 399 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 ANGPTL8Q6UXH0 198 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 KIF18BQ86Y91 864 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 DENND1CQ8IV53 801 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 PIANPQ8IYJ0 282 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 MAL2Q969L2 176 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 PSKH2Q96QS6 385 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 TRAF4Q9BUZ4 470 aaPredicted RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 C1QTNF6Q9BXI9 259 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 POLR2J2Q9GZM3 115 aaKnown RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 PAK6Q9NQU5 681 aaPredicted RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 PCDHGB3Q9Y5G1 929 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 MOXD2PA6NHM9 499 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 SLC9A3R1O14745 358 aaPredicted RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 LZTS3O60299 673 aaPredicted RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 RFPL3O75679 317 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 IGHA2P01877 340 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 NUDT7P0C024 238 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 WARSP23381 471 aaKnown RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 HOXC8P31273 242 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 TALDO1P37837 337 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 EIF4HQ15056 248 aaKnown RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 SNAPC1Q16533 368 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 PSAPL1Q6NUJ1 521 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 MZT2BQ6NZ67 158 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 OTOP2Q7RTS6 562 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 BHLHA9Q7RTU4 235 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 FAM124AQ86V42 546 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF280BQ86YH2 543 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZBED6CLQ96FA7 236 aaPredicted RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 SIPA1Q96FS4 1042 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 TOE1Q96GM8 510 aaKnown RBP14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 RACGAP1Q9H0H5 632 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 CDCP1Q9H5V8 836 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 TSC2P49815 1807 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 ZNF236Q9UL36 1845 aa14.15□□□□□ -0.14
NCKIPSD-204ENST00000416649 ISM1B1AKI9 464 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 KLK8O60259 260 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 PEX11BO96011 259 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 PRKAR1AP10644 381 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 BRAT1Q6PJG6 821 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 KIAA1324Q6UXG2 1013 aaKnown RBP14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 RNF180Q86T96 592 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 LGI4Q8N135 537 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 GDPD1Q8N9F7 314 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 C9orf43Q8TAL5 461 aaPredicted RBP14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 TMCC3Q9ULS5 477 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 CCL27Q9Y4X3 112 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 FNDC1Q4ZHG4 1894 aaPredicted RBP14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 TET1Q8NFU7 2136 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 IRAK2O43187 625 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 CCNB2O95067 398 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 GATMP50440 423 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 IL18Q14116 193 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 UBE2Q1Q7Z7E8 422 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 GPR150Q8NGU9 434 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 CD200R1Q8TD46 325 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 WACQ9BTA9 647 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 WWOXQ9NZC7 414 aa14.14□□□□□ -0.15
NCKIPSD-204ENST00000416649 SRRDQ9UH36 339 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms