RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TAS2R7Q9NYW3 318 aa13.77□□□□□ -0.21
PCDHA11-201ENST00000398640 A0A1W2PPL8 197 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 E7EQ34 232 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 RPLP0P05388 317 aaKnown RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 PTX3P26022 381 aaPredicted RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 FOXK1P85037 733 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 KLHL36Q8N4N3 616 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 PNLDC1Q8NA58 520 aaKnown RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 RHBDD1Q8TEB9 315 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 MSX1P28360 303 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 BNIP1Q12981 228 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SERINC3Q13530 473 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SLC2A7Q6PXP3 512 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 LRRC70Q7Z2Q7 622 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SLC30A8Q8IWU4 369 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 UBQLNLQ8IYU4 475 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 ZSCAN4Q8NAM6 433 aaPredicted RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SLC22A8Q8TCC7 542 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 TMED9Q9BVK6 235 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SMURF2Q9HAU4 748 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 PAK6Q9NQU5 681 aaPredicted RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 DNAJB9Q9UBS3 223 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 LOC100509620A0A075B734 347 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SLC35F4A4IF30 521 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 A6NL46 340 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 TEX46H3BTG2 121 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 NANOGNBQ7Z5D8 188 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SPERTQ8NA61 448 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 OR4F6Q8NGB9 312 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 TRIM43Q96BQ3 446 aaPredicted RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 LYARQ9NX58 379 aaKnown RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 A8MT66 165 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SELENOVP59797 346 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 RPL26P61254 145 aaKnown RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SLC3A1Q07837 685 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 PPP1R8Q12972 351 aaKnown RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 DSC3Q14574 896 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 ASPNQ9BXN1 380 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 TTTY10Q9BZA0 68 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 TOR3AQ9H497 397 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SCN1BQ07699 218 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SCGB2B2Q4G0G5 96 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 RBM20Q5T481 1227 aaKnown RBP13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 CEACAM20Q6UY09 585 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 HSDL2Q6YN16 418 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 GPRIN1Q7Z2K8 1008 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 GPALPP1Q8IXQ4 340 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 LGI4Q8N135 537 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SLC5A11Q8WWX8 675 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 SHISA4Q96DD7 197 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 PCDHGA6Q9Y5G7 932 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 MAU2Q9Y6X3 613 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 KAT6AQ92794 2004 aa13.76□□□□□ -0.21
PCDHA11-201ENST00000398640 H3BNC9 293 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 BEST1O76090 585 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 RPS15P62841 145 aaKnown RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TMEM115Q12893 351 aaPredicted RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 ECH1Q13011 328 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 GPRC6AQ5T6X5 926 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 CARD17Q5XLA6 110 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TESCQ96BS2 214 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 DCBLD2Q96PD2 775 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TM9SF2Q99805 663 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 XYLT2Q9H1B5 865 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 PARPBPQ9NWS1 579 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 ETAA1Q9NY74 926 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 MYH8P13535 1937 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 IGLON5A6NGN9 336 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 CSTBP04080 98 aaKnown RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 S100A6P06703 90 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF806P0C7X5 589 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 CLRN1P58418 232 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 SRYQ05066 204 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 DNASE1L3Q13609 305 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 LACTB2Q53H82 288 aaPredicted RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TMEM151BQ8IW70 566 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 FOXRED2Q8IWF2 684 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 CCDC36Q8IYA8 594 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF548Q8NEK5 533 aaPredicted RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 LRRC3Q9BY71 257 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 MEAF6Q9HAF1 191 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 USP29Q9HBJ7 922 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 PRTFDC1Q9NRG1 225 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 RNF11Q9Y3C5 154 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 J3QLW9 94 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TLR4O00206 839 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 SCO2O43819 266 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 CYP17A1P05093 508 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TACSTD2P09758 323 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF19P17023 458 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 MATN1P21941 496 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 DPY19L1Q2PZI1 675 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 C14orf80Q86SX3 495 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 ZNF761Q86XN6 746 aaPredicted RBP13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TMEM25Q86YD3 366 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 SDR16C5Q8N3Y7 309 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 PLEKHO2Q8TD55 490 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 OXSMQ9NWU1 459 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 TRBC2A0A5B9 178 aa13.75□□□□□ -0.21
PCDHA11-201ENST00000398640 ITGA5P08648 1049 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms