RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 NCKAP1Q9Y2A7 1128 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 PCDHB11Q9Y5F2 797 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 MUC3AQ02505 3323 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ARHGEF33A8MVX0 844 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 SNPHO15079 494 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 POP7O75817 140 aaKnown RBP4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ELFN1P0C7U0 828 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 AZGP1P25311 298 aaKnown RBP4.75□□□□□ -1.65
SMAD4-202ENST00000398417 GMFBP60983 142 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 SLC13A2Q13183 592 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 SP140Q13342 867 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 KIAA0040Q15053 153 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ARSJQ5FYB0 599 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-202ENST00000398417 TYW3Q6IPR3 259 aaKnown RBP4.75□□□□□ -1.65
SMAD4-202ENST00000398417 COMMD1Q8N668 190 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 XAGE5Q8WWM1 108 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 S100ZQ8WXG8 99 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 SLC38A4Q969I6 547 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 MUL1Q969V5 352 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF347Q96SE7 839 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CSF3RQ99062 836 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CITED2Q99967 270 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-202ENST00000398417 NTMT1Q9BV86 223 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 IL36AQ9UHA7 158 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CORINQ9Y5Q5 1042 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 AP1M2Q9Y6Q5 423 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CABIN1Q9Y6J0 2220 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ATRXP46100 2492 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 DLGAP1O14490 977 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 KIAA0355O15063 1070 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 TGM5O43548 720 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 SOX14O95416 240 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 PPIBP23284 216 aaKnown RBP4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CDK2P24941 298 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 B4GALNT1Q00973 533 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CPZQ66K79 652 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CCDC80Q76M96 950 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 DSG4Q86SJ6 1040 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF420Q8TAQ5 688 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-202ENST00000398417 TANKQ92844 425 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 TCEAL4Q96EI5 215 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 OR51E2Q9H255 320 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CLN6Q9NWW5 311 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 BTBD3Q9Y2F9 522 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 TRIM43BA6NCK2 446 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 SH2D7A6NKC9 451 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-202ENST00000398417 BCHEP06276 602 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 C8orf89P0DMQ9 161 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 C1GALT1C1LP0DN25 315 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ETFAP13804 333 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 DDX6P26196 483 aaKnown RBP eCLIP4.75□□□□□ -1.653e-7■■■■□ 23.2
SMAD4-202ENST00000398417 DCKP27707 260 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 PTGER1P34995 402 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 PLA2G16P53816 162 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 DSTNP60981 165 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 VLDLRP98155 873 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 STX4Q12846 297 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ADNP2Q6IQ32 1131 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 SDE2Q6IQ49 451 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 GPR149Q86SP6 731 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 RADILQ96JH8 1075 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 CDADC1Q9BWV3 514 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 GPR83Q9NYM4 423 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 ADAMTSL1Q8N6G6 1762 aa4.75□□□□□ -1.65
SMAD4-202ENST00000398417 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 NPIPA7E9PJI5 369 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 RPLP0P05388 317 aaKnown RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 NPIPA8P0DM63 369 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 CTNNB1P35222 781 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 CRISP1P54107 249 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 PTPN5P54829 565 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 POLR2LP62875 67 aaKnown RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 AMZ1Q400G9 498 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 YAF2Q8IY57 180 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 KBTBD8Q8NFY9 601 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 F2RL3Q96RI0 385 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 IL4I1Q96RQ9 567 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TUBA1CQ9BQE3 449 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 DCSTAMPQ9H295 470 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SPHK2Q9NRA0 654 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 HCFC1R1Q9NWW0 138 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 FAM120CQ9NX05 1096 aaKnown RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TAS2R16Q9NYV7 291 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TMEM9Q9P0T7 183 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ENPP5Q9UJA9 477 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 EFCAB9A8MZ26 197 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TSPAN19P0C672 248 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ACADMP11310 421 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 CSNK1DP48730 415 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 DEFA1P59665 94 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 DEFA3P59666 94 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ELP6Q0PNE2 266 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TMEM115Q12893 351 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-202ENST00000398417 PLA2G7Q13093 441 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TDGQ13569 410 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 KLHL24Q6TFL4 600 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 OR6Q1Q8NGQ2 317 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 TEX12Q9BXU0 123 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 ALOXE3Q9BYJ1 711 aa4.74□□□□□ -1.65
SMAD4-202ENST00000398417 SNTG1Q9NSN8 517 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms