RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 COX20Q5RI15 118 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 ERICH5Q6P6B1 374 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 EIF3MQ7L2H7 374 aaKnown RBP22.81■■□□□ 1.24
PABPN1-202ENST00000397276 OR5AK3PQ8NH89 298 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 SP7Q8TDD2 431 aaPredicted RBP22.81■■□□□ 1.24
PABPN1-202ENST00000397276 WFIKKN2Q8TEU8 576 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 MUL1Q969V5 352 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 SORBS1Q9BX66 1292 aaKnown RBP22.81■■□□□ 1.24
PABPN1-202ENST00000397276 SZT2Q5T011 3432 aa22.81■■□□□ 1.24
PABPN1-202ENST00000397276 PSMD11O00231 422 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 C1GALT1C1LP0DN25 315 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 ITGB7P26010 798 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 TGFBR1P36897 503 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 CRYBA2P53672 197 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 CDK5R2Q13319 367 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 CCDC92Q53HC0 331 aaPredicted RBP22.8■■□□□ 1.24
PABPN1-202ENST00000397276 FAM78AQ5JUQ0 283 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 GPR155Q7Z3F1 870 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 ETFBKMTQ8IXQ9 262 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 SYNPOQ8N3V7 929 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 ATG16L2Q8NAA4 619 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 FAM129BQ96TA1 746 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 ZCCHC2Q9C0B9 1178 aaKnown RBP22.8■■□□□ 1.24
PABPN1-202ENST00000397276 KLHL25Q9H0H3 589 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 TRIM39Q9HCM9 518 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 HOXC11O43248 304 aaPredicted RBP22.8■■□□□ 1.24
PABPN1-202ENST00000397276 C6orf47O95873 294 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 KLK1P06870 262 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 ETFAP13804 333 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 VBP1P61758 197 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 ADPRMQ3LIE5 342 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 ADGRD2Q7Z7M1 963 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 CERS4Q9HA82 394 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 HMG20AQ9NP66 347 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 DYRK4Q9NR20 520 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 KIF17Q9P2E2 1029 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 PMF1-BGLAPU3KQ54 211 aa22.8■■□□□ 1.24
PABPN1-202ENST00000397276 PCMT1P22061 227 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 DNAJA1P31689 397 aaKnown RBP22.79■■□□□ 1.24
PABPN1-202ENST00000397276 C2orf80Q0P641 193 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 CYP27C1Q4G0S4 372 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 MMP21Q8N119 569 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 OR5AR1Q8NGP9 310 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 RUBCNLQ9H714 662 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 POU2F3Q9UKI9 436 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 SLC27A6Q9Y2P4 619 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 BMP4P12644 408 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 MAP2K4P45985 399 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 CLK3P49761 638 aaKnown RBP22.79■■□□□ 1.24
PABPN1-202ENST00000397276 ELP6Q0PNE2 266 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 KCNJ8Q15842 424 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 INAQ16352 499 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 ANXA8L1Q5VT79 327 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 SLC5A11Q8WWX8 675 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 STARD8Q92502 1023 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 UBE2FQ969M7 185 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 DMRT3Q9NQL9 472 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 BTNL2Q9UIR0 455 aa22.79■■□□□ 1.24
PABPN1-202ENST00000397276 TCF20Q9UGU0 1960 aaKnown RBP22.79■■□□□ 1.24
PABPN1-202ENST00000397276 TBC1D3BA6NDS4 549 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 SLC16A6O15403 523 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 NDUFS2O75306 463 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 PCSK2P16519 638 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 GSSP48637 474 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 TAS2R50P59544 299 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 EMX1Q04741 257 aaPredicted RBP22.78■■□□□ 1.24
PABPN1-202ENST00000397276 ZNF763Q0D2J5 394 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 BCL7AQ4VC05 210 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 COQ8BQ96D53 544 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 REPS1Q96D71 796 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 MAGED4Q96JG8 741 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 NODALQ96S42 347 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 TM7SF3Q9NS93 570 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 GPATCH2Q9NW75 528 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 ZNF451Q9Y4E5 1061 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 SNX5Q9Y5X3 404 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 EDDM13A0A1B0GTR0 161 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 GRXCR1A8MXD5 290 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 ANGPTL1O95841 491 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 TGM1P22735 817 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 PNLIPRP1P54315 467 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 ELAVL3Q14576 367 aaKnown RBP22.78■■□□□ 1.24
PABPN1-202ENST00000397276 HIST2H2ACQ16777 129 aaPredicted RBP22.78■■□□□ 1.24
PABPN1-202ENST00000397276 RFX4Q33E94 735 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 HIST2H2AA3Q6FI13 130 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 SPPL2AQ8TCT8 520 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 RHNO1Q9BSD3 238 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 EPHX3Q9H6B9 360 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 REEP4Q9H6H4 257 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 REEP1Q9H902 201 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 CCDC177Q9NQR7 707 aaPredicted RBP22.78■■□□□ 1.24
PABPN1-202ENST00000397276 RASSF1Q9NS23 344 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 SIRT5Q9NXA8 310 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 THUMPD1Q9NXG2 353 aaKnown RBP22.78■■□□□ 1.24
PABPN1-202ENST00000397276 SUV39H1O43463 412 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 PAPLNO95428 1278 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 NADKO95544 446 aaPredicted RBP22.78■■□□□ 1.24
PABPN1-202ENST00000397276 OR1E2P47887 323 aa22.78■■□□□ 1.24
PABPN1-202ENST00000397276 SMN1Q16637 294 aaKnown RBP22.78■■□□□ 1.24
PABPN1-202ENST00000397276 KDM4DQ6B0I6 523 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms