RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 CLSTN3Q9BQT9 956 aa13.84□□□□□ -0.19
TNFRSF1B-201ENST00000376259 TTTY10Q9BZA0 68 aa13.84□□□□□ -0.19
TNFRSF1B-201ENST00000376259 PIKFYVEQ9Y2I7 2098 aa13.84□□□□□ -0.19
TNFRSF1B-201ENST00000376259 RLFQ13129 1914 aa13.83□□□□□ -0.19
TNFRSF1B-201ENST00000376259 CASKO14936 926 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZW10O43264 779 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CA12O43570 354 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KCNK5O95279 499 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CYP2A6P11509 494 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 UGT2B15P54855 530 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NFE2L1Q14494 772 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SF3B4Q15427 424 aaKnown RBP eCLIP13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CRTC2Q53ET0 693 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PRSS36Q5K4E3 855 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 DCST1Q5T197 706 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 STEAP3Q658P3 488 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SMARCD3Q6STE5 483 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 USP43Q70EL4 1123 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 OR6Q1Q8NGQ2 317 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FNDC11Q9BVV2 318 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ASPNQ9BXN1 380 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SLC29A3Q9BZD2 475 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZNF334Q9HCZ1 680 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RIMKLBQ9ULI2 386 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SSR3Q9UNL2 185 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GPR52Q9Y2T5 361 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PCDHB11Q9Y5F2 797 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ARHGEF33A8MVX0 844 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TTC34A8MYJ7 566 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RFPL2O75678 378 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SRCP12931 536 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 LHCGRP22888 699 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 AOAHP28039 575 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IFNA8P32881 189 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CSRP3P50461 194 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PPP5CP53041 499 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HBA1P69905 142 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TIMM50Q3ZCQ8 353 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 LY6G5CQ5SRR4 150 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GDPD4Q6W3E5 623 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 LRRC70Q7Z2Q7 622 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GALNT7Q86SF2 657 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TSPYL5Q86VY4 417 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ZSWIM9Q86XI8 627 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PAPD5Q8NDF8 572 aaKnown RBP13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 OR7G3Q8NG95 312 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NEIL2Q969S2 332 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PPP1R14BQ96C90 147 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TMEM39AQ9NV64 488 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ARHGEF9O43307 516 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CPNE6O95741 557 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 USP51Q70EK9 711 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 DOHHQ9BU89 302 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 INIPQ9NRY2 104 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 INSL5Q9Y5Q6 135 aa13.83□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FEZF1A0PJY2 475 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SGTAO43765 313 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IL3P08700 152 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PRR35P0CG20 571 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ITGA2P17301 1181 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CRISP3P54108 245 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CAV3P56539 151 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CTF1Q16619 201 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KLHL12Q53G59 568 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 HSD11B1LQ7Z5J1 315 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 WDR48Q8TAF3 677 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 IGSF21Q96ID5 467 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MMP28Q9H239 520 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 P2RY12Q9H244 342 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TRPV5Q9NQA5 729 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TAC3Q9UHF0 121 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TMEFF2Q9UIK5 374 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 A0A1B0GVC2 190 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 A6NIN4 97 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FRS3O43559 492 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PABPC1P11940 636 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 SSR2P43308 183 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ASMTP46597 345 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MTA1Q13330 715 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 RGNQ15493 299 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 KIAA1161Q6NSJ0 714 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 ENTHD1Q8IYW4 607 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FBXW2Q9UKT8 454 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CDH7Q9ULB5 785 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CLCA3PQ9Y6N3 262 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CCDC182A6NF36 153 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 OR1F1O43749 312 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MMP20O60882 483 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PAX3P23760 479 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 PPP2R1BP30154 601 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NTHL1P78549 312 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 TMEM115Q12893 351 aaPredicted RBP13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 MRPL28Q13084 256 aaKnown RBP13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 GAB1Q13480 694 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 B3GNT7Q8NFL0 401 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 CASD1Q96PB1 797 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 NEK6Q9HC98 313 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 FBXO10Q9UK96 956 aa13.82□□□□□ -0.2
TNFRSF1B-201ENST00000376259 AREL1O15033 823 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms