RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 C12orf40Q86WS4 652 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 FUBP3Q96I24 572 aaKnown RBP eCLIP15.55■□□□□ 0.08
RXRA-201ENST00000356384 SYT17Q9BSW7 474 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 STRA6Q9BX79 667 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 SLC29A3Q9BZD2 475 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 COL20A1Q9P218 1284 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 DNAJB4Q9UDY4 337 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 J3KR12 359 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 RNF13O43567 381 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 GABBR2O75899 941 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 ADH5P11766 374 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 RPS3P23396 243 aaKnown RBP eCLIP15.55■□□□□ 0.08
RXRA-201ENST00000356384 VIPR1P32241 457 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 SH3D19Q5HYK7 790 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 ADGRF1Q5T601 910 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 HMBOX1Q6NT76 420 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 FAM86B1Q8N7N1 296 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 CMKLR1Q99788 373 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 MT-ND5P03915 603 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 MRPL3P09001 348 aaKnown RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 F8A1P23610 371 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 ADH7P40394 386 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 ASTE1Q2TB18 679 aaPredicted RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 BTBD16Q32M84 506 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 HAGHLQ6PII5 290 aaPredicted RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 HSPA12BQ96MM6 686 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 CCSER2Q9H7U1 834 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 TIGARQ9NQ88 270 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 KCNN3Q9UGI6 736 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 PADI2Q9Y2J8 665 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 TMED5Q9Y3A6 229 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 PCDHB11Q9Y5F2 797 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 VNN1O95497 513 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 RBMXP38159 391 aaKnown RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 GHRHRQ02643 423 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 MLLT1Q03111 559 aaPredicted RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 MTFR2Q6P444 385 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 ZDHHC24Q6UX98 284 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 TCEANCQ8N8B7 351 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 OR9I1Q8NGQ6 314 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 AUTS2Q8WXX7 1259 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 NSMAFQ92636 917 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 SH3YL1Q96HL8 342 aaPredicted RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 BTBD1Q9H0C5 482 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 TM9SF3Q9HD45 589 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 KCNK6Q9Y257 313 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 MMP20O60882 483 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 ACVRL1P37023 503 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 SOX2P48431 317 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 Q8N9G6 341 aaPredicted RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 TFGQ92734 400 aaPredicted RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 C11orf84Q9BUA3 381 aaPredicted RBP15.55■□□□□ 0.08
RXRA-201ENST00000356384 HIF3AQ9Y2N7 669 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 LRRC42Q9Y546 428 aa15.55■□□□□ 0.08
RXRA-201ENST00000356384 SFTPBP07988 381 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 ANXA3P12429 323 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 HNRNPA0Q13151 305 aaKnown RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 CYP1B1Q16678 543 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 RNF130Q86XS8 419 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 TICAM1Q8IUC6 712 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 TIGD4Q8IY51 512 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 SLAIN1Q8ND83 568 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 SNIP1Q8TAD8 396 aaKnown RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 GATAD2BQ8WXI9 593 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 NTAN1Q96AB6 310 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 PEX12O00623 359 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 USP2O75604 605 aaPredicted RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 IL1R2P27930 398 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 HADHBP55084 474 aaKnown RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 PER3P56645 1201 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 ID2Q02363 134 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 ZNF267Q14586 743 aaPredicted RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 LASP1Q14847 261 aaKnown RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 OR6N2Q8NGY6 317 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 RBP7Q96R05 134 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 ZNF395Q9H8N7 513 aaPredicted RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 LIN28AQ9H9Z2 209 aaKnown RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 KCNS2Q9ULS6 477 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 TMEM98Q9Y2Y6 226 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 RNF11Q9Y3C5 154 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 CDH10Q9Y6N8 788 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 M0R233 179 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 KLK3P07288 261 aaPredicted RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 ZNF81P51508 661 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 TAS2R43P59537 309 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 DLK2Q6UY11 383 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 NPAS3Q8IXF0 933 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 NECAB3Q96P71 396 aaPredicted RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 LRRN3E7EW58 273 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 FLRT2O43155 660 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 PIM1P11309 404 aaPredicted RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 CD97P48960 835 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 ENTPD1P49961 510 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 NR0B1P51843 470 aaKnown RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 RABL3Q5HYI8 236 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 BRAT1Q6PJG6 821 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 RPS27LQ71UM5 84 aaKnown RBP15.54■□□□□ 0.08
RXRA-201ENST00000356384 ZNF283Q8N7M2 679 aa15.54■□□□□ 0.08
RXRA-201ENST00000356384 LRRN3Q9H3W5 708 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms