RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CREB3L4Q8TEY5 395 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 UBTD2Q8WUN7 234 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 HHIPL1Q96JK4 782 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 TRIB3Q96RU7 358 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 PRRG3Q9BZD7 231 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 SLC23A1Q9UHI7 598 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 ZMYM5Q9UJ78 669 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 NOD1Q9Y239 953 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 LINC00854A0A1B0GVQ3 168 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 CLIC1O00299 241 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 EPN2O95208 641 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 FAM157BP0CG42 384 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 COL6A1P12109 1028 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 PRPH2P23942 346 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 MAPK1P28482 360 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 GPC1P35052 558 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 IDH2P48735 452 aaKnown RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 GPR15P49685 360 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 PER3P56645 1201 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 CDC42P60953 191 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 MRPL28Q13084 256 aaKnown RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 SLC14A1Q13336 389 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 PPIGQ13427 754 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 MRPL58Q14197 206 aaKnown RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 DMC1Q14565 340 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 ZNF235Q14590 738 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 MFSD13AQ14CX5 517 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 DUOXA1Q1HG43 343 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 DEFB115Q30KQ5 88 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 NDUFAF5Q5TEU4 345 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 SDHAF4Q5VUM1 108 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 SBSNQ6UWP8 590 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 PAMR1Q6UXH9 720 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 NLRP8Q86W28 1048 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 TMC8Q8IU68 726 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 SYNPOQ8N3V7 929 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 OR4C15Q8NGM1 316 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 WDR36Q8NI36 951 aaKnown RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 SH3KBP1Q96B97 665 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 RPRD1AQ96P16 312 aaPredicted RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 MARVELD1Q9BSK0 173 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 TRIM45Q9H8W5 580 aaPredicted RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 ABCB9Q9NP78 766 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 EXOSC4Q9NPD3 245 aaKnown RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 SNTG1Q9NSN8 517 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 CLN6Q9NWW5 311 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 RABL2AQ9UBK7 228 aaPredicted RBP14.38□□□□□ -0.11
TRAF3-202ENST00000351691 DHRS7Q9Y394 339 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 PCDHGB7Q9Y5F8 929 aa14.38□□□□□ -0.11
TRAF3-202ENST00000351691 FFAR2O15552 330 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 HLA-FP30511 346 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 OR1G1P47890 313 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 POU6F2P78424 691 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-202ENST00000351691 HOXC5Q00444 222 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 SMARCB1Q12824 385 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 MTAPQ13126 283 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 CTXN3Q4LDR2 81 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 C10orf120Q5SQS8 335 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 PDE12Q6L8Q7 609 aaKnown RBP14.37□□□□□ -0.11
TRAF3-202ENST00000351691 GPALPP1Q8IXQ4 340 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 SLC5A8Q8N695 610 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 FAM193BQ96PV7 902 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-202ENST00000351691 MAPKAP1Q9BPZ7 522 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 MED18Q9BUE0 208 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 NDUFB11Q9NX14 153 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 PTTG3PQ9NZH4 202 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 FBXO9Q9UK97 447 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-202ENST00000351691 SSR3Q9UNL2 185 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 CEP350Q5VT06 3117 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 NPIPB8E9PQR5 432 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 B4GALT3O60512 393 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 CSF2P04141 144 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 PRKAR1AP10644 381 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 ENGP17813 658 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 POU3F3P20264 500 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-202ENST00000351691 GRK4P32298 578 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 CLCN7P51798 805 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 RGS1Q08116 209 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 NOGQ13253 232 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 MICAQ29983 383 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 C18orf21Q32NC0 220 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-202ENST00000351691 CLLU1OSQ5K130 101 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 DDI2Q5TDH0 399 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 PXDC1Q5TGL8 231 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 METAP1DQ6UB28 335 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-202ENST00000351691 RTN4RL1Q86UN2 441 aaPredicted RBP14.37□□□□□ -0.11
TRAF3-202ENST00000351691 KIF18BQ86Y91 864 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 GHDCQ8N2G8 530 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 OR4K2Q8NGD2 314 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 MAGEH1Q9H213 219 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 SPNS1Q9H2V7 528 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 PDFQ9HBH1 243 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 FZD3Q9NPG1 666 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 TMEM39AQ9NV64 488 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 OARD1Q9Y530 152 aa14.37□□□□□ -0.11
TRAF3-202ENST00000351691 SLC9A3R1O14745 358 aaPredicted RBP14.36□□□□□ -0.11
TRAF3-202ENST00000351691 TAPBPO15533 448 aa14.36□□□□□ -0.11
TRAF3-202ENST00000351691 SUV39H1O43463 412 aa14.36□□□□□ -0.11
TRAF3-202ENST00000351691 ORC5O43913 435 aa14.36□□□□□ -0.11
TRAF3-202ENST00000351691 CCNB2O95067 398 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms